(5 nodes) Regulator of K+ conductance, C-terminal domain superfamily network (Streptomyces sp. CNQ509)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKH82894.1	Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)
	AKH85283.1	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
	AKH85284.1	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	AKH87056.1	Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
	AKH85901.1	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)

Your Current Organism:

Streptomyces sp. CNQ509

NCBI taxonomy Id: 444103
Other names: S. sp. CNQ-509, Streptomyces sp. CNQ-509

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKH82894.1	AKH85283.1	AA958_12365	AA958_27005	Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.450
AKH82894.1	AKH85284.1	AA958_12365	AA958_27010	Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
AKH85283.1	AKH82894.1	AA958_27005	AA958_12365	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.450
AKH85283.1	AKH85284.1	AA958_27005	AA958_27010	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
AKH85283.1	AKH85901.1	AA958_27005	AA958_30960	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.440
AKH85284.1	AKH82894.1	AA958_27010	AA958_12365	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
AKH85284.1	AKH85283.1	AA958_27010	AA958_27005	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
AKH85284.1	AKH85901.1	AA958_27010	AA958_30960	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.440
AKH85901.1	AKH85283.1	AA958_30960	AA958_27005	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.440
AKH85901.1	AKH85284.1	AA958_30960	AA958_27010	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.440