STRINGSTRING
Emin_0233 Emin_0233 Emin_0235 Emin_0235 Emin_0236 Emin_0236 Emin_0237 Emin_0237 Emin_0238 Emin_0238 Emin_0383 Emin_0383 Emin_0543 Emin_0543 Emin_0574 Emin_0574 Emin_0575 Emin_0575 Emin_0576 Emin_0576 Emin_0577 Emin_0577 Emin_0578 Emin_0578 Emin_0579 Emin_0579 Emin_0580 Emin_0580 Emin_0581 Emin_0581 Emin_0582 Emin_0582 Emin_0583 Emin_0583 Emin_0584 Emin_0584 Emin_0585 Emin_0585 Emin_0586 Emin_0586 Emin_0587 Emin_0587 Emin_0778 Emin_0778 Emin_0779 Emin_0779 Emin_0780 Emin_0780 Emin_0782 Emin_0782 Emin_0783 Emin_0783 Emin_0784 Emin_0784 Emin_0785 Emin_0785
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Emin_0233PFAM: protein of unknown function DUF34; KEGG: afu:AF1777 hypothetical protein. (248 aa)
Emin_0235Hypothetical protein; KEGG: amt:Amet_3479 putative type IV pilin. (151 aa)
Emin_0236Type II secretion system subunit; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (260 aa)
Emin_0237Hypothetical protein; KEGG: mgm:Mmc1_2696 polypeptide-transport-associated domain protein, ShlB-type. (277 aa)
Emin_0238KEGG: hhe:HH1639 hypothetical protein. (291 aa)
Emin_0383PilE-like protein; KEGG: syn:sll1694 cyanobacterial pilin. (168 aa)
Emin_0543TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: gme:Gmet_0199 pilus retraction protein PilT. (362 aa)
Emin_0574KEGG: cdf:CD2052 putative lipoprotein. (549 aa)
Emin_0575Putatively involved in type II secretion system; KEGG: tth:TTC1013 pilus-associated protein PilM. (536 aa)
Emin_0576Hypothetical protein. (229 aa)
Emin_0577Hypothetical protein; KEGG: rno:681287 similar to proline arginine rich coiled coil 1. (275 aa)
Emin_0578PFAM: type II and III secretion system protein; Secretin/TonB short domain; KEGG: ade:Adeh_0645 type II and III secretion system protein, secretin. (527 aa)
Emin_0579PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mxa:MXAN_5788 type IV-A pilus assembly ATPase PilB. (576 aa)
Emin_0580PFAM: type II secretion system protein; KEGG: gme:Gmet_1395 type II secretion system protein. (412 aa)
Emin_0581PilE-like protein; KEGG: abo:ABO_0468 secretion protein, putative. (165 aa)
Emin_0582PilE-like protein; KEGG: asu:Asuc_0613 prepilin peptidase dependent protein D. (173 aa)
Emin_0583PilE-like protein; KEGG: tel:tll1011 type 4 prepilin-like protein. (166 aa)
Emin_0584Hypothetical protein. (174 aa)
Emin_0585Hypothetical protein; KEGG: det:DET1354 type II secretion system protein, putative. (201 aa)
Emin_0586Hypothetical protein. (118 aa)
Emin_0587Hypothetical protein; KEGG: tel:tlr1066 translation initiation factor IF-2. (504 aa)
Emin_0778Hypothetical protein. (37 aa)
Emin_0779Type II secretion system subunit; KEGG: psa:PST_1054 fimbrial protein EcpC precursor. (136 aa)
Emin_0780PilE-like protein; KEGG: syn:sll1694 cyanobacterial pilin. (157 aa)
Emin_0782DNA-directed RNA polymerase, sigma subunit RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (380 aa)
Emin_0783PFAM: regulatory protein MarR; KEGG: stm:STM1520 DNA-binding transcriptional repressor MarR. (158 aa)
Emin_0784PFAM: Abortive infection protein; KEGG: cbf:CLI_1153 CAAX amino terminal protease family protein. (245 aa)
Emin_0785Putative membrane protein; KEGG: ctc:CTC01237 putative sodium-glucose/galactose cotransporter. (199 aa)
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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