STRINGSTRING
Ndas_0134 Ndas_0134 Ndas_1500 Ndas_1500 Ndas_3020 Ndas_3020 Ndas_3021 Ndas_3021 Ndas_3022 Ndas_3022 Ndas_3023 Ndas_3023 Ndas_3024 Ndas_3024 Ndas_3885 Ndas_3885 Ndas_5226 Ndas_5226 Ndas_5268 Ndas_5268
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ndas_0134COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: bfa:Bfae_22670 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: C1YHJ8 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase. (191 aa)
Ndas_1500KEGG: tfu:Tfu_1772 hypothetical protein; SPTR: C1YJ87 Putative uncharacterized protein. (371 aa)
Ndas_3020COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tfu:Tfu_2026 putative glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: C1YRS1 Glycosyltransferase (Fragment); PFAM: Glycosyl transferases group 1. (360 aa)
Ndas_3021COGs: COG0728 membrane protein putative virulence factor; InterPro IPR004268; KEGG: tfu:Tfu_2027 hypothetical protein; PFAM: virulence factor MVIN family protein; SPTR: C1YW81 Uncharacterized membrane protein, putative virulence factor (Fragment); PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN. (540 aa)
Ndas_3022KEGG: tfu:Tfu_2028 hypothetical protein; SPTR: C1YW80 Putative uncharacterized protein. (236 aa)
Ndas_3023KEGG: tfu:Tfu_2029 hypothetical protein; SPTR: C1YW79 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3186). (373 aa)
Ndas_3024Thiamin pyrophosphokinase catalytic region; COGs: COG4825 Uncharacterized membrane-anchored protein; InterPro IPR007371; KEGG: tcu:Tcur_2172 thiamin pyrophosphokinase catalytic region; PFAM: Thiamin pyrophosphokinase catalytic region; SPTR: C1YW78 Uncharacterized membrane-anchored protein; PFAM: Thiamine pyrophosphokinase C terminal; Thiamin pyrophosphokinase, catalytic domain. (404 aa)
Ndas_3885GtrA family protein; COGs: COG2246 membrane protein; InterPro IPR007267; KEGG: tfu:Tfu_2548 hypothetical protein; PFAM: GtrA family protein; SPTR: C1YKW5 Predicted membrane protein, COG2246; PFAM: GtrA-like protein. (169 aa)
Ndas_5226KEGG: tfu:Tfu_0334 hypothetical protein; SPTR: C1YIP0 Putative uncharacterized protein. (783 aa)
Ndas_5268InterPro IPR001173; KEGG: tfu:Tfu_3054 glycosyltransferase involved in cell wall biogenesis; PFAM: glycosyl transferase family 2; SPTR: C1YS97 Glycosyl transferase; PFAM: Glycosyl transferase family 2. (282 aa)
Your Current Organism:
Nocardiopsis dassonvillei
NCBI taxonomy Id: 446468
Other names: N. dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei str. DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111
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