STRINGSTRING
Ndas_0022 Ndas_0022 Ndas_0464 Ndas_0464 Ndas_0680 Ndas_0680 Ndas_0764 Ndas_0764 Ndas_2594 Ndas_2594 Ndas_3165 Ndas_3165 Ndas_3903 Ndas_3903 Ndas_3921 Ndas_3921 Ndas_3927 Ndas_3927 Ndas_4113 Ndas_4113 Ndas_4428 Ndas_4428 nuoI nuoI Ndas_5473 Ndas_5473
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Ndas_00224Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017900:IPR001450:IPR014603:IPR017896; KEGG: svi:Svir_19180 formate dehydrogenase beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C1YR75 Formate dehydrogenase beta subunit; PFAM: 4Fe-4S binding domain; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing. (294 aa)
Ndas_0464FAD dependent oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR017896:IPR006076; KEGG: tfu:Tfu_2332 putative cholesterol oxidase; PFAM: FAD dependent oxidoreductase; SPTR: C1YLT7 Choline dehydrogenase-like flavoprotein; PFAM: FAD binding domain; GMC oxidoreductase. (657 aa)
Ndas_0680Protein of unknown function DUF224 cysteine-rich region domain protein; COGs: COG0247 Fe-S oxidoreductase; InterProIPR017900:IPR001450:IPR004017:IPR017896:IPR 012285:IPR009051:IPR012257; KEGG: tcu:Tcur_3273 protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C1YNI0 Fe-S oxidoreductase; PFAM: Cysteine-rich domain. (440 aa)
Ndas_0764FAD linked oxidase domain protein; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016166:IPR016164:IPR016167:IPR004017:IPR 004113:IPR017900:IPR006094; KEGG: svi:Svir_08570 FAD/FMN-dependent dehydrogenase; PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: C1YN90 FAD/FMN-dependent dehydrogenase; PFAM: Cysteine-rich domain; FAD binding domain; FAD linked oxidases, C-terminal domain. (987 aa)
Ndas_2594Protein of unknown function DUF162; COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain; InterPro IPR012285:IPR003741:IPR009051; KEGG: sma:SAV_7411 iron-sulfur protein; PFAM: protein of unknown function DUF162; SPTR: C1YT56 Uncharacterized conserved protein containing a ferredoxin-like domain; PFAM: Uncharacterised ACR, YkgG family COG1556; TIGRFAM: 2[4Fe-4S] protein, putative. (475 aa)
Ndas_3165Glutamate synthase, NADH/NADPH, small subunit; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR000759:IPR017896:IPR012285:IPR009051:IPR 013027:IPR001327:IPR006005; KEGG: tfu:Tfu_1174 glutamate synthase (NADH) small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: C1YUQ8 Glutamate synthase (NADH) small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit. (484 aa)
Ndas_39034Fe-4S ferredoxin iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (106 aa)
Ndas_3921COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR001041:IPR009051:IPR004489:IPR001450:IPR 012675:IPR012285:IPR006058:IPR017900:IPR017896; KEGG: tfu:Tfu_2451 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; ferredoxin; SPTR: C1YKT0 Succinate dehydrogenase subunit B; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein. (248 aa)
Ndas_3927COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR001041:IPR006058:IPR012675:IPR012285:IPR 009051:IPR004489; KEGG: nfa:nfa56030 fumarate reductase iron-sulfur subunit; PFAM: ferredoxin; SPTR: C1YKS4 Succinate dehydrogenase subunit B; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein. (263 aa)
Ndas_4113Molybdopterin oxidoreductase Fe4S4 region; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR001041:IPR017896:IPR006655:IPR001450:IPR 017900:IPR006963; KEGG: sma:SAV_1836 NADH dehydrogenase I chain G; PFAM: molybdopterin oxidoreductase Fe4S4 region; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C1YSE3 Uncharacterized anaerobic dehydrogenase; PFAM: 2Fe-2S iron-sulfur cluster binding domain; 4Fe-4S binding domain; Molybdopterin oxidoreductase Fe4S4 domain. (313 aa)
Ndas_4428COGs: COG1140 Nitrate reductase beta subunit; InterPro IPR006547:IPR017896; KEGG: sro:Sros_1923 nitrate reductase (beta subunit); SPTR: C1YGD8 Respiratory nitrate reductase beta subunit; TIGRFAM: nitrate reductase, beta subunit; TIGRFAM: nitrate reductase, beta subunit. (588 aa)
nuoINADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (185 aa)
Ndas_5473CoB--CoM heterodisulfide reductase; COGs: COG0247 Fe-S oxidoreductase; InterProIPR017896:IPR012285:IPR017900:IPR004017:IPR 009051; KEGG: tfu:Tfu_0195 putative iron-sulphur-binding reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; PRIAM: CoB--CoM heterodisulfide reductase; SPTR: C1YPV9 Fe-S oxidoreductase; PFAM: Cysteine-rich domain. (737 aa)
Your Current Organism:
Nocardiopsis dassonvillei
NCBI taxonomy Id: 446468
Other names: N. dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei str. DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111
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