STRINGSTRING
Snas_1123 Snas_1123 Snas_1124 Snas_1124 Snas_1125 Snas_1125 Snas_1126 Snas_1126 Snas_3128 Snas_3128 Snas_3129 Snas_3129 Snas_3130 Snas_3130 Snas_3621 Snas_3621 Snas_3622 Snas_3622 Snas_3623 Snas_3623 Snas_4651 Snas_4651 Snas_4652 Snas_4652 Snas_4653 Snas_4653 Snas_4654 Snas_4654 Snas_4655 Snas_4655 Snas_4656 Snas_4656 Snas_4657 Snas_4657 Snas_4658 Snas_4658
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snas_1123PFAM: ROK family protein; KEGG: mxa:MXAN_6549 ROK family transcriptional regulator. (836 aa)
Snas_1124PFAM: inner-membrane translocator; KEGG: avi:Avi_7376 ABC transporter membrane spanning protein (xylose); Belongs to the binding-protein-dependent transport system permease family. (417 aa)
Snas_1125PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL100463 putative ATP-binding component of ABC transporter. (266 aa)
Snas_1126KEGG: rso:RSp1633 D-xylose-binding periplasmic ABC transporter protein. (367 aa)
Snas_3128PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0892 ABC sugar transporter, ATPase subunit. (275 aa)
Snas_3129PFAM: inner-membrane translocator; KEGG: pna:Pnap_2604 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (335 aa)
Snas_3130PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B0894 ABC sugar transporter, periplasmic ligand binding protein. (335 aa)
Snas_3621PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B0894 ABC sugar transporter, periplasmic ligand binding protein. (329 aa)
Snas_3622PFAM: inner-membrane translocator; KEGG: pna:Pnap_2604 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (334 aa)
Snas_3623PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0892 ABC sugar transporter, ATPase subunit. (266 aa)
Snas_4651PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; KEGG: vei:Veis_3268 xylose isomerase domain- containing protein. (334 aa)
Snas_4652PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rsp:RSP_3671 putative D-tagatose 3-epimerase. (290 aa)
Snas_4653ABC-type sugar transport system periplasmic component-like protein; KEGG: bmt:BSUIS_B0991 hypothetical protein. (397 aa)
Snas_4654PFAM: inner-membrane translocator; KEGG: sme:SMc02019 ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (333 aa)
Snas_4655PFAM: inner-membrane translocator; KEGG: eta:ETA_00150 ribose transport permease system protein. (337 aa)
Snas_4656PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lhk:LHK_01712 RbsA. (506 aa)
Snas_4657PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; Oxidoreductase domain; KEGG: smt:Smal_1047 oxidoreductase domain protein. (366 aa)
Snas_4658PFAM: ROK family protein; KEGG: vei:Veis_3275 ROK family protein. (503 aa)
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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