STRINGSTRING
sucC sucC sucD sucD Snas_0615 Snas_0615 fumC fumC Snas_1016 Snas_1016 Snas_1222 Snas_1222 Snas_3033 Snas_3033 Snas_3093 Snas_3093 Snas_4565 Snas_4565 Snas_5158 Snas_5158 Snas_5226 Snas_5226 Snas_5227 Snas_5227 Snas_5228 Snas_5228 Snas_5518 Snas_5518 Snas_5519 Snas_5519 Snas_6383 Snas_6383
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sucCsuccinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (392 aa)
sucDsuccinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (295 aa)
Snas_0615Lactate/malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. (316 aa)
fumCFumarate lyase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (464 aa)
Snas_1016PFAM: Citrate synthase; KEGG: mlo:mll3842 citrate synthase 2; Belongs to the citrate synthase family. (366 aa)
Snas_1222KEGG: rpt:Rpal_4362 isocitrate dehydrogenase, NADP- dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (405 aa)
Snas_3033Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (914 aa)
Snas_3093PFAM: Citrate synthase; KEGG: atu:Atu5306 citrate synthase 2; Belongs to the citrate synthase family. (378 aa)
Snas_4565Malate dehydrogenase (oxaloacetate- decarboxylating); PFAM: malic protein NAD-binding; amino acid-binding ACT domain protein; malic protein domain protein; KEGG: sat:SYN_00517 NAD-dependent malic enzyme. (476 aa)
Snas_5158Malate dehydrogenase (oxaloacetate- decarboxylating); PFAM: malic protein NAD-binding; malic protein domain protein; UBA/THIF-type NAD/FAD binding protein; KEGG: tau:Tola_0213 malate dehydrogenase (oxaloacetate-decarboxylating). (386 aa)
Snas_5226TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: ank:AnaeK_2722 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family. (232 aa)
Snas_5227KEGG: scl:sce6554 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase. (646 aa)
Snas_5228PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: scl:sce6555 succinate dehydrogenase/fumarate reductase iron-sulfur subunit. (247 aa)
Snas_5518PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: bcm:Bcenmc03_3592 succinate dehydrogenase flavoprotein subunit. (641 aa)
Snas_5519TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: mrd:Mrad2831_5989 succinate dehydrogenase and fumarate reductase iron-sulfur protein. (254 aa)
Snas_6383Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (547 aa)
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.