STRINGSTRING
Snas_2982 Snas_2982 Snas_3196 Snas_3196 Snas_3197 Snas_3197 Snas_3198 Snas_3198 Snas_3199 Snas_3199 Snas_3200 Snas_3200 Snas_4140 Snas_4140 Snas_4141 Snas_4141 Snas_4142 Snas_4142 Snas_4143 Snas_4143 Snas_4144 Snas_4144 Snas_5507 Snas_5507 Snas_5508 Snas_5508 Snas_5509 Snas_5509 Snas_5510 Snas_5510 Snas_5511 Snas_5511 Snas_5512 Snas_5512 Snas_5513 Snas_5513 Snas_5514 Snas_5514 Snas_5515 Snas_5515 Snas_5516 Snas_5516
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snas_2982PFAM: extracellular solute-binding protein family 5; KEGG: mlo:mll0599 hypothetical protein. (573 aa)
Snas_3196PFAM: extracellular solute-binding protein family 5; KEGG: mlo:mlr6082 ABC transporter, binding protein component. (600 aa)
Snas_3197PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_0670 binding-protein-dependent transport systems inner membrane component. (328 aa)
Snas_3198PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr6084 ABC transporter, permease. (260 aa)
Snas_3199KEGG: mxa:MXAN_4665 oligopeptide/dipeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (319 aa)
Snas_3200KEGG: mlo:mlr6086 ABC transporter, ATP-binding component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (321 aa)
Snas_4140KEGG: reh:H16_B0716 ABC-type transporter, ATPase component: PepT family; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (370 aa)
Snas_4141KEGG: reh:H16_B1125 ABC-type transporter, ATPase component: PepT family; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (344 aa)
Snas_4142PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gbm:Gbem_2642 binding-protein-dependent transport systems inner membrane component. (311 aa)
Snas_4143PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hap:HAPS_0937 dipeptide transport system permease protein DppB. (335 aa)
Snas_4144PFAM: extracellular solute-binding protein family 5; KEGG: oan:Oant_3598 extracellular solute-binding protein family 5. (527 aa)
Snas_5507PFAM: extracellular solute-binding protein family 5; KEGG: ara:Arad_12429 extracellular solute-binding protein. (582 aa)
Snas_5508Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bra:BRADO1097 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (355 aa)
Snas_5509KEGG: vei:Veis_4963 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (347 aa)
Snas_5510PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll0597 permease of oligopeptide ABC transporter. (331 aa)
Snas_5511PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gme:Gmet_1236 binding-protein dependent transport system inner membrane protein. (322 aa)
Snas_5512KEGG: rme:Rmet_4580 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (366 aa)
Snas_5513Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bra:BRADO1096 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (353 aa)
Snas_5514PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_2052 binding-protein-dependent transport systems inner membrane component. (309 aa)
Snas_5515PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO3020 putative ABC transporter permease protein; putative oligopeptide/dipeptide transport protein. (334 aa)
Snas_5516PFAM: extracellular solute-binding protein family 5; KEGG: asa:ASA_1879 ABC-type oligopeptide transporter, periplasmic binding protein. (528 aa)
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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