STRINGSTRING
Snas_0758 Snas_0758 Snas_0654 Snas_0654 Snas_1125 Snas_1125 Snas_1126 Snas_1126 Snas_1223 Snas_1223 Snas_1410 Snas_1410 Snas_2143 Snas_2143 Snas_2144 Snas_2144 Snas_2146 Snas_2146 Snas_2147 Snas_2147 Snas_2889 Snas_2889 Snas_2890 Snas_2890 Snas_3128 Snas_3128 Snas_3293 Snas_3293 Snas_3623 Snas_3623 Snas_3696 Snas_3696 rbsA rbsA Snas_4024 Snas_4024 Snas_4656 Snas_4656 Snas_5891 Snas_5891
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snas_0758PFAM: extracellular solute-binding protein family 1; KEGG: yen:YE0460 putative sugar binding protein. (443 aa)
Snas_0654PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcs:BCAN_A1367 hypothetical protein. (267 aa)
Snas_1125PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL100463 putative ATP-binding component of ABC transporter. (266 aa)
Snas_1126KEGG: rso:RSp1633 D-xylose-binding periplasmic ABC transporter protein. (367 aa)
Snas_1223PFAM: phosphoryl transfer system HPr; KEGG: vcj:VCD_001827 phosphocarrier protein nitrogen regulation associated. (93 aa)
Snas_1410PFAM: extracellular solute-binding protein family 1; KEGG: rle:RL3809 putative solute-binding component of ABC transporter. (482 aa)
Snas_2143TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system lactose/cellobiose- specific IIB subunit; phosphotransferase system EIIC; KEGG: pin:Ping_0088 PTS system, mannitol-specific IIABC protein. (490 aa)
Snas_2144PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ppr:PBPRB0363 putative mannitol-specific IIABC component, PTS system. (148 aa)
Snas_2146Phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: psa:PST_1027 putative phosphocarrier protein. (94 aa)
Snas_2147Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (538 aa)
Snas_2889KEGG: rec:RHECIAT_CH0003387 xylose ABC transporter, substrate-binding protein. (359 aa)
Snas_2890PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rlt:Rleg2_2913 ABC transporter related. (516 aa)
Snas_3128PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0892 ABC sugar transporter, ATPase subunit. (275 aa)
Snas_3293Hypothetical protein. (393 aa)
Snas_3623PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0892 ABC sugar transporter, ATPase subunit. (266 aa)
Snas_3696PFAM: extracellular solute-binding protein family 1; KEGG: asu:Asuc_0319 maltose ABC transporter periplasmic protein. (546 aa)
rbsAABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (510 aa)
Snas_4024Hypothetical protein. (125 aa)
Snas_4656PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lhk:LHK_01712 RbsA. (506 aa)
Snas_5891PFAM: extracellular solute-binding protein family 1; KEGG: vha:VIBHAR_05214 maltose ABC transporter periplasmic protein. (402 aa)
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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