STRINGSTRING
Snas_0567 Snas_0567 Snas_0997 Snas_0997 Snas_2539 Snas_2539 Snas_3339 Snas_3339 Snas_3488 Snas_3488 Snas_4625 Snas_4625 Snas_5002 Snas_5002 Snas_5003 Snas_5003 Snas_5005 Snas_5005 murB murB Snas_5704 Snas_5704 Snas_5899 Snas_5899 Snas_6057 Snas_6057 Snas_6404 Snas_6404
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snas_0567KEGG: bur:Bcep18194_B3008 FAD-linked oxidoreductase; TIGRFAM: FAD-linked oxidoreductase; PFAM: D-arabinono-14-lactone oxidase; FAD linked oxidase domain protein. (435 aa)
Snas_0997PFAM: Berberine/berberine domain protein; FAD linked oxidase domain protein; KEGG: rpi:Rpic_3700 berberine/berberine domain protein. (539 aa)
Snas_2539PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: smd:Smed_4005 molybdopterin dehydrogenase FAD- binding. (287 aa)
Snas_3339PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: afw:Anae109_1606 FAD linked oxidase domain- containing protein. (448 aa)
Snas_3488PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: sde:Sde_0518 histidine kinase. (474 aa)
Snas_4625PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: gme:Gmet_2368 CBS:transporter-associated region. (426 aa)
Snas_5002PFAM: FAD linked oxidase domain protein; KEGG: acp:A2cp1_3046 FAD linked oxidase domain protein. (450 aa)
Snas_5003D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: afw:Anae109_2921 D-lactate dehydrogenase (cytochrome). (483 aa)
Snas_5005PFAM: FAD linked oxidase domain protein; KEGG: rfr:Rfer_0825 FAD linked oxidase-like. (447 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (347 aa)
Snas_5704PFAM: FAD linked oxidase domain protein; KEGG: scl:sce0752 putative glycolate oxidase. (458 aa)
Snas_5899PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: scl:sce2495 hemolysin. (430 aa)
Snas_6057PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: mxa:MXAN_2246 oxidoreductase, FAD-dependent. (451 aa)
Snas_6404PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: shl:Shal_2699 hypothetical protein. (452 aa)
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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