STRINGSTRING
Xcel_1090 Xcel_1090 era era Xcel_1086 Xcel_1086 Xcel_1087 Xcel_1087 Xcel_1091 Xcel_1091
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Xcel_1090Hypothetical protein; KEGG: hha:Hhal_1736 putative ABC transporter. (737 aa)
eraGTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. (319 aa)
Xcel_1086Hypothetical protein; KEGG: hha:Hhal_1736 putative ABC transporter. (551 aa)
Xcel_1087KEGG: hha:Hhal_1735 putative ABC transporter. (523 aa)
Xcel_1091KEGG: hha:Hhal_1735 putative ABC transporter. (585 aa)
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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