STRINGSTRING
Xcel_1721 Xcel_1721 Xcel_1423 Xcel_1423 Xcel_0084 Xcel_0084 Xcel_3081 Xcel_3081 Xcel_2520 Xcel_2520 Xcel_2482 Xcel_2482 Xcel_2374 Xcel_2374 Xcel_1636 Xcel_1636
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Xcel_1721PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bcz:BCZK2266 D-alanyl-D-alanine carboxypeptidase. (321 aa)
Xcel_1423PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: acp:A2cp1_3829 response regulator receiver protein. (237 aa)
Xcel_0084PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; PT repeat-containing protein; KEGG: similar to microtubule-associated protein 6. (722 aa)
Xcel_3081PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: SNF2 superfamily protein. (410 aa)
Xcel_2520PFAM: hydrophobic; peptidase M15B and M15C DD- carboxypeptidase VanY/endolysin; SMART: hydrophobic; KEGG: sdn:Sden_2868 peptidase S8 and S53, subtilisin, kexin, sedolisin. (461 aa)
Xcel_2482PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: hypothetical protein. (447 aa)
Xcel_2374PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mxa:MXAN_0560 penicillin-resistant dd- carboxypeptidase. (495 aa)
Xcel_1636PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mxa:MXAN_0560 penicillin-resistant dd- carboxypeptidase. (407 aa)
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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