6 items (Dictyostelium discoideum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dymB	Dynamin-B; Enzyme hydrolyzing GTP; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (920 aa)
	dymA	Dynamin-A; Function in membrane trafficking processes along the endo- lysosomal pathway. (853 aa)
	dlpA	Dynamin-like protein A; Involved in cytokinesis. May hydrolyze GTP. (880 aa)
	dlpC	Dynamin-like protein C; Involved in cytokinesis. May hydrolyze GTP. (904 aa)
	DDB0205282	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (568 aa)
	dlpB	Dynamin-like protein B; Involved in cytokinesis. May hydrolyze GTP. (808 aa)

Your Current Organism:

Dictyostelium discoideum

NCBI taxonomy Id: 44689
Other names: D. discoideum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
dlpA	dlpC	Q55F94	Q55AX0	Dynamin-like protein A; Involved in cytokinesis. May hydrolyze GTP.	Dynamin-like protein C; Involved in cytokinesis. May hydrolyze GTP.	0.443
dlpB	dymA	Q54MH8	Q94464	Dynamin-like protein B; Involved in cytokinesis. May hydrolyze GTP.	Dynamin-A; Function in membrane trafficking processes along the endo- lysosomal pathway.	0.791
dlpB	dymB	Q54MH8	Q9U1M9	Dynamin-like protein B; Involved in cytokinesis. May hydrolyze GTP.	Dynamin-B; Enzyme hydrolyzing GTP; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.787
dlpC	dlpA	Q55AX0	Q55F94	Dynamin-like protein C; Involved in cytokinesis. May hydrolyze GTP.	Dynamin-like protein A; Involved in cytokinesis. May hydrolyze GTP.	0.443
dymA	dlpB	Q94464	Q54MH8	Dynamin-A; Function in membrane trafficking processes along the endo- lysosomal pathway.	Dynamin-like protein B; Involved in cytokinesis. May hydrolyze GTP.	0.791
dymB	dlpB	Q9U1M9	Q54MH8	Dynamin-B; Enzyme hydrolyzing GTP; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Dynamin-like protein B; Involved in cytokinesis. May hydrolyze GTP.	0.787