17 items (Histoplasma capsulatum G186AR) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCBG_01738	Uncharacterized protein. (147 aa)
	HCBG_02256	Uncharacterized protein. (200 aa)
	HCBG_03835	GRF zinc finger domain-containing protein. (488 aa)
	HCBG_03836	Uncharacterized protein. (430 aa)
	HCBG_03837	Uncharacterized protein. (140 aa)
	HCBG_03838	Uncharacterized protein. (102 aa)
	HCBG_05187	Uncharacterized protein. (110 aa)
	HCBG_05352	Uncharacterized protein. (100 aa)
	HCBG_06535	Uncharacterized protein. (1572 aa)
	HCBG_07272	Uncharacterized protein. (181 aa)
	HCBG_07292	RING-type domain-containing protein. (175 aa)
	HCBG_07531	Uncharacterized protein. (576 aa)
	HCBG_08626	Uncharacterized protein. (256 aa)
	HCBG_08801	Chromo domain-containing protein. (960 aa)
	HCBG_09024	Uncharacterized protein. (383 aa)
	HCBG_09025	Uncharacterized protein. (1309 aa)
	HCBG_09228	MATH and UCH domain-containing protein. (1509 aa)

Your Current Organism:

Histoplasma capsulatum G186AR

NCBI taxonomy Id: 447093
Other names: Ajellomyces capsulatus G186AR, H. capsulatum G186AR

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCBG_01738	HCBG_02256	C0NFS2	C0NIJ9	Uncharacterized protein.	Uncharacterized protein.	0.722
HCBG_01738	HCBG_03835	C0NFS2	C0NL05	Uncharacterized protein.	GRF zinc finger domain-containing protein.	0.802
HCBG_01738	HCBG_03836	C0NFS2	C0NL06	Uncharacterized protein.	Uncharacterized protein.	0.683
HCBG_01738	HCBG_03837	C0NFS2	C0NL07	Uncharacterized protein.	Uncharacterized protein.	0.683
HCBG_01738	HCBG_03838	C0NFS2	C0NL08	Uncharacterized protein.	Uncharacterized protein.	0.683
HCBG_01738	HCBG_05187	C0NFS2	C0NPV7	Uncharacterized protein.	Uncharacterized protein.	0.722
HCBG_01738	HCBG_05352	C0NFS2	C0NQS2	Uncharacterized protein.	Uncharacterized protein.	0.722
HCBG_01738	HCBG_07272	C0NFS2	C0NVU2	Uncharacterized protein.	Uncharacterized protein.	0.683
HCBG_01738	HCBG_07292	C0NFS2	C0NVW2	Uncharacterized protein.	RING-type domain-containing protein.	0.683
HCBG_01738	HCBG_07531	C0NFS2	C0NWK1	Uncharacterized protein.	Uncharacterized protein.	0.722
HCBG_01738	HCBG_08626	C0NFS2	C0NZP6	Uncharacterized protein.	Uncharacterized protein.	0.722
HCBG_01738	HCBG_09024	C0NFS2	C0P0U4	Uncharacterized protein.	Uncharacterized protein.	0.681
HCBG_01738	HCBG_09025	C0NFS2	C0P0U5	Uncharacterized protein.	Uncharacterized protein.	0.681
HCBG_02256	HCBG_01738	C0NIJ9	C0NFS2	Uncharacterized protein.	Uncharacterized protein.	0.722
HCBG_02256	HCBG_03835	C0NIJ9	C0NL05	Uncharacterized protein.	GRF zinc finger domain-containing protein.	0.603
HCBG_02256	HCBG_03836	C0NIJ9	C0NL06	Uncharacterized protein.	Uncharacterized protein.	0.469
HCBG_02256	HCBG_03837	C0NIJ9	C0NL07	Uncharacterized protein.	Uncharacterized protein.	0.469
HCBG_02256	HCBG_03838	C0NIJ9	C0NL08	Uncharacterized protein.	Uncharacterized protein.	0.469
HCBG_02256	HCBG_07272	C0NIJ9	C0NVU2	Uncharacterized protein.	Uncharacterized protein.	0.469
HCBG_02256	HCBG_07292	C0NIJ9	C0NVW2	Uncharacterized protein.	RING-type domain-containing protein.	0.469