8 items (Histoplasma capsulatum G186AR) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCBG_02256	Uncharacterized protein. (200 aa)
	HCBG_06535	Uncharacterized protein. (1572 aa)
	HCBG_07272	Uncharacterized protein. (181 aa)
	HCBG_07292	RING-type domain-containing protein. (175 aa)
	HCBG_08626	Uncharacterized protein. (256 aa)
	HCBG_09024	Uncharacterized protein. (383 aa)
	HCBG_09025	Uncharacterized protein. (1309 aa)
	HCBG_09228	MATH and UCH domain-containing protein. (1509 aa)

Your Current Organism:

Histoplasma capsulatum G186AR

NCBI taxonomy Id: 447093
Other names: Ajellomyces capsulatus G186AR, H. capsulatum G186AR

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCBG_02256	HCBG_07272	C0NIJ9	C0NVU2	Uncharacterized protein.	Uncharacterized protein.	0.469
HCBG_02256	HCBG_07292	C0NIJ9	C0NVW2	Uncharacterized protein.	RING-type domain-containing protein.	0.469
HCBG_02256	HCBG_09024	C0NIJ9	C0P0U4	Uncharacterized protein.	Uncharacterized protein.	0.563
HCBG_02256	HCBG_09025	C0NIJ9	C0P0U5	Uncharacterized protein.	Uncharacterized protein.	0.563
HCBG_06535	HCBG_09024	C0NTQ5	C0P0U4	Uncharacterized protein.	Uncharacterized protein.	0.736
HCBG_06535	HCBG_09025	C0NTQ5	C0P0U5	Uncharacterized protein.	Uncharacterized protein.	0.683
HCBG_07272	HCBG_02256	C0NVU2	C0NIJ9	Uncharacterized protein.	Uncharacterized protein.	0.469
HCBG_07272	HCBG_08626	C0NVU2	C0NZP6	Uncharacterized protein.	Uncharacterized protein.	0.469
HCBG_07272	HCBG_09024	C0NVU2	C0P0U4	Uncharacterized protein.	Uncharacterized protein.	0.625
HCBG_07272	HCBG_09025	C0NVU2	C0P0U5	Uncharacterized protein.	Uncharacterized protein.	0.625
HCBG_07292	HCBG_02256	C0NVW2	C0NIJ9	RING-type domain-containing protein.	Uncharacterized protein.	0.469
HCBG_07292	HCBG_08626	C0NVW2	C0NZP6	RING-type domain-containing protein.	Uncharacterized protein.	0.469
HCBG_07292	HCBG_09024	C0NVW2	C0P0U4	RING-type domain-containing protein.	Uncharacterized protein.	0.625
HCBG_07292	HCBG_09025	C0NVW2	C0P0U5	RING-type domain-containing protein.	Uncharacterized protein.	0.625
HCBG_08626	HCBG_07272	C0NZP6	C0NVU2	Uncharacterized protein.	Uncharacterized protein.	0.469
HCBG_08626	HCBG_07292	C0NZP6	C0NVW2	Uncharacterized protein.	RING-type domain-containing protein.	0.469
HCBG_08626	HCBG_09024	C0NZP6	C0P0U4	Uncharacterized protein.	Uncharacterized protein.	0.563
HCBG_08626	HCBG_09025	C0NZP6	C0P0U5	Uncharacterized protein.	Uncharacterized protein.	0.563
HCBG_09024	HCBG_02256	C0P0U4	C0NIJ9	Uncharacterized protein.	Uncharacterized protein.	0.563
HCBG_09024	HCBG_06535	C0P0U4	C0NTQ5	Uncharacterized protein.	Uncharacterized protein.	0.736