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YTM1 YTM1 HCBG_00187 HCBG_00187 HCBG_01043 HCBG_01043 HCBG_01589 HCBG_01589 HCBG_01686 HCBG_01686 HCBG_02250 HCBG_02250 HCBG_03216 HCBG_03216 HCBG_04012 HCBG_04012 HCBG_04209 HCBG_04209 HCBG_04241 HCBG_04241 HCBG_04280 HCBG_04280 ERB1 ERB1 NOP7 NOP7 HCBG_07415 HCBG_07415 HCBG_09222 HCBG_09222
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (490 aa)
HCBG_00187Ribosomal large subunit. (261 aa)
HCBG_01043Uncharacterized protein. (402 aa)
HCBG_01589Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (243 aa)
HCBG_01686Uncharacterized protein. (363 aa)
HCBG_02250Ribosomal biogenesis protein Gar2. (530 aa)
HCBG_03216GTP-binding protein. (547 aa)
HCBG_0401260S ribosomal protein L24B. (191 aa)
HCBG_04209RNA helicase. (631 aa)
HCBG_04241Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (565 aa)
HCBG_04280Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (666 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (788 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (697 aa)
HCBG_0741560S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (194 aa)
HCBG_09222Nucleolar protein NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (704 aa)
Your Current Organism:
Histoplasma capsulatum G186AR
NCBI taxonomy Id: 447093
Other names: Ajellomyces capsulatus G186AR, H. capsulatum G186AR
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