STRINGSTRING
SPB1 SPB1 HCBG_01839 HCBG_01839 HCBG_02684 HCBG_02684 HCBG_02828 HCBG_02828 HCBG_02250 HCBG_02250 HCBG_03575 HCBG_03575 HCBG_03794 HCBG_03794 HCBG_04416 HCBG_04416 HCBG_04012 HCBG_04012 HCBG_04209 HCBG_04209 HCBG_05108 HCBG_05108 HCBG_05291 HCBG_05291 HCBG_06546 HCBG_06546 HCBG_07415 HCBG_07415 HCBG_07416 HCBG_07416 HCBG_07629 HCBG_07629 HCBG_08333 HCBG_08333 HCBG_08697 HCBG_08697 HCBG_08788 HCBG_08788 HCBG_08803 HCBG_08803 HCBG_01263 HCBG_01263 HCBG_01231 HCBG_01231 HCBG_00187 HCBG_00187
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (779 aa)
HCBG_01839Ribosome biogenesis protein RPF2. (338 aa)
HCBG_02684C2H2-type domain-containing protein. (115 aa)
HCBG_02828Protein MAK16; Belongs to the MAK16 family. (329 aa)
HCBG_02250Ribosomal biogenesis protein Gar2. (530 aa)
HCBG_03575CCAAT-box-binding transcription factor. (1115 aa)
HCBG_03794RNA helicase. (638 aa)
HCBG_04416Uncharacterized protein. (243 aa)
HCBG_0401260S ribosomal protein L24B. (191 aa)
HCBG_04209RNA helicase. (631 aa)
HCBG_05108ATP-dependent RNA helicase DBP10. (940 aa)
HCBG_05291ATP-dependent RNA helicase DBP3; Belongs to the DEAD box helicase family. (487 aa)
HCBG_06546DUF1665 domain-containing protein. (302 aa)
HCBG_0741560S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (194 aa)
HCBG_07416Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (685 aa)
HCBG_07629Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (230 aa)
HCBG_08333Cell division cycle protein. (753 aa)
HCBG_0869760S ribosomal subunit assembly/export protein LOC1. (194 aa)
HCBG_08788Ribosome biogenesis protein BRX1. (383 aa)
HCBG_08803F-box domain-containing protein. (380 aa)
HCBG_01263Nucleolar complex protein. (776 aa)
HCBG_01231ATP-dependent RNA helicase DBP6. (843 aa)
HCBG_00187Ribosomal large subunit. (261 aa)
Your Current Organism:
Histoplasma capsulatum G186AR
NCBI taxonomy Id: 447093
Other names: Ajellomyces capsulatus G186AR, H. capsulatum G186AR
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