17 items (Histoplasma capsulatum G186AR) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

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protein homology

Your Input:
	HCBG_00112	Sm domain-containing protein. (201 aa)
	HCBG_00897	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (123 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (124 aa)
	HCBG_01413	Sm domain-containing protein. (174 aa)
	HCBG_01634	Small nuclear ribonucleoprotein Sm D2. (114 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	HCBG_01863	Small nuclear ribonucleoprotein G. (78 aa)
	HCBG_03569	Uncharacterized protein. (591 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	HCBG_04316	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (113 aa)
	HCBG_05069	Sm domain-containing protein. (90 aa)
	HCBG_08056	Mechanosensitive ion channel protein. (964 aa)
	HCBG_07800	Small nuclear ribonucleoprotein Sm D3. (116 aa)
	HCBG_09087	LSM domain-containing protein. (80 aa)
	HCBG_08256	LSM domain-containing protein. (129 aa)
	HCBG_08990	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	HCBG_08999	Mechanosensitive ion channel protein. (986 aa)

Your Current Organism:

Histoplasma capsulatum G186AR

NCBI taxonomy Id: 447093
Other names: Ajellomyces capsulatus G186AR, H. capsulatum G186AR

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCBG_00112	HCBG_00897	C0NAG6	C0NCQ1	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.979
HCBG_00112	HCBG_01413	C0NAG6	C0NEU7	Sm domain-containing protein.	Sm domain-containing protein.	0.513
HCBG_00112	HCBG_01634	C0NAG6	C0NFG8	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.946
HCBG_00112	HCBG_01863	C0NAG6	C0NG47	Sm domain-containing protein.	Small nuclear ribonucleoprotein G.	0.913
HCBG_00112	HCBG_04316	C0NAG6	C0NLD6	Sm domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.939
HCBG_00112	HCBG_05069	C0NAG6	C0NPI9	Sm domain-containing protein.	Sm domain-containing protein.	0.941
HCBG_00112	HCBG_07800	C0NAG6	C0NY06	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D3.	0.954
HCBG_00112	HCBG_08990	C0NAG6	C0P0R0	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.421
HCBG_00112	LSM3	C0NAG6	C0NFH9	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.402
HCBG_00112	LSM4	C0NAG6	C0NDB1	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.450
HCBG_00897	HCBG_00112	C0NCQ1	C0NAG6	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Sm domain-containing protein.	0.979
HCBG_00897	HCBG_01413	C0NCQ1	C0NEU7	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Sm domain-containing protein.	0.984
HCBG_00897	HCBG_01634	C0NCQ1	C0NFG8	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.999
HCBG_00897	HCBG_01863	C0NCQ1	C0NG47	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein G.	0.999
HCBG_00897	HCBG_04316	C0NCQ1	C0NLD6	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
HCBG_00897	HCBG_05069	C0NCQ1	C0NPI9	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Sm domain-containing protein.	0.999
HCBG_00897	HCBG_07800	C0NCQ1	C0NY06	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3.	0.999
HCBG_00897	HCBG_08256	C0NCQ1	C0NYM6	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	LSM domain-containing protein.	0.999
HCBG_00897	HCBG_08990	C0NCQ1	C0P0R0	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.983
HCBG_00897	HCBG_09087	C0NCQ1	C0P107	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	LSM domain-containing protein.	0.980