STRINGSTRING
HCBG_04316 HCBG_04316 HCBG_00081 HCBG_00081 HCBG_00112 HCBG_00112 HCBG_00184 HCBG_00184 HCBG_00356 HCBG_00356 HCBG_00386 HCBG_00386 HCBG_00535 HCBG_00535 HCBG_00560 HCBG_00560 HCBG_00569 HCBG_00569 HCBG_00880 HCBG_00880 HCBG_01379 HCBG_01379 HCBG_01391 HCBG_01391 HCBG_01863 HCBG_01863 HCBG_03331 HCBG_03331 HCBG_04604 HCBG_04604 HCBG_04027 HCBG_04027 CLP1 CLP1 HCBG_05069 HCBG_05069 HCBG_05073 HCBG_05073 HCBG_05254 HCBG_05254 HCBG_05806 HCBG_05806 HCBG_06329 HCBG_06329 HCBG_06689 HCBG_06689 HCBG_06759 HCBG_06759 HCBG_06833 HCBG_06833 HCBG_08220 HCBG_08220 HCBG_07799 HCBG_07799 HCBG_07800 HCBG_07800 HCBG_07935 HCBG_07935 HCBG_08263 HCBG_08263 HCBG_08332 HCBG_08332 HCBG_09093 HCBG_09093 HCBG_09233 HCBG_09233
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HCBG_04316Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (113 aa)
HCBG_00081Pre-mRNA-splicing factor spp2. (572 aa)
HCBG_00112Sm domain-containing protein. (201 aa)
HCBG_00184SRm160/300 splicing coactivator. (555 aa)
HCBG_00356GTP-binding protein EsdC. (263 aa)
HCBG_00386Splicing factor U2AF 23 kDa subunit. (209 aa)
HCBG_00535Pre-mRNA-splicing factor. (1022 aa)
HCBG_00560SAP domain-containing protein. (287 aa)
HCBG_00569U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (571 aa)
HCBG_00880RRM domain-containing protein. (300 aa)
HCBG_01379Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (600 aa)
HCBG_01391DUF455 domain-containing protein. (1256 aa)
HCBG_01863Small nuclear ribonucleoprotein G. (78 aa)
HCBG_03331WD domain-containing protein. (454 aa)
HCBG_04604Uncharacterized protein. (363 aa)
HCBG_04027RNP domain-containing protein. (150 aa)
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (584 aa)
HCBG_05069Sm domain-containing protein. (90 aa)
HCBG_05073DUF866 domain-containing protein. (156 aa)
HCBG_05254Splicing factor SluA. (480 aa)
HCBG_05806Uncharacterized protein. (612 aa)
HCBG_06329Cleavage and polyadenylation specific factor 5. (300 aa)
HCBG_06689mRNA 3'-end-processing protein rna14. (1053 aa)
HCBG_06759Uncharacterized protein. (367 aa)
HCBG_06833Uncharacterized protein. (314 aa)
HCBG_08220Pre-mRNA-splicing factor. (583 aa)
HCBG_07799Uncharacterized protein. (434 aa)
HCBG_07800Small nuclear ribonucleoprotein Sm D3. (116 aa)
HCBG_07935Uncharacterized protein. (455 aa)
HCBG_08263Nuclear matrix protein. (654 aa)
HCBG_08332RRM domain-containing protein. (436 aa)
HCBG_09093Uncharacterized protein. (748 aa)
HCBG_09233Splicing factor U2AF 23 kDa subunit. (147 aa)
Your Current Organism:
Histoplasma capsulatum G186AR
NCBI taxonomy Id: 447093
Other names: Ajellomyces capsulatus G186AR, H. capsulatum G186AR
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