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BWQ96_07687 BWQ96_07687 BWQ96_05735 BWQ96_05735 BWQ96_05418 BWQ96_05418 BWQ96_05488 BWQ96_05488 BWQ96_05661 BWQ96_05661 BWQ96_06619 BWQ96_06619 BWQ96_05878 BWQ96_05878 BWQ96_06033 BWQ96_06033 BWQ96_06122 BWQ96_06122 BWQ96_06196 BWQ96_06196 BWQ96_06381 BWQ96_06381 BWQ96_06456 BWQ96_06456 BWQ96_06446 BWQ96_06446 BWQ96_06436 BWQ96_06436 BWQ96_07461 BWQ96_07461 BWQ96_06484 BWQ96_06484 BWQ96_06574 BWQ96_06574 BWQ96_06558 BWQ96_06558 BWQ96_06571 BWQ96_06571 BWQ96_06573 BWQ96_06573 BWQ96_06659 BWQ96_06659 BWQ96_06774 BWQ96_06774 BWQ96_06887 BWQ96_06887 BWQ96_07047 BWQ96_07047 BWQ96_07107 BWQ96_07107 BWQ96_07325 BWQ96_07325 BWQ96_10654 BWQ96_10654 BWQ96_10653 BWQ96_10653 BWQ96_10582 BWQ96_10582 BWQ96_10464 BWQ96_10464 BWQ96_10404 BWQ96_10404 BWQ96_10095 BWQ96_10095 BWQ96_09967 BWQ96_09967 BWQ96_09879 BWQ96_09879 BWQ96_09810 BWQ96_09810 BWQ96_09613 BWQ96_09613 BWQ96_09513 BWQ96_09513 BWQ96_09414 BWQ96_09414 BWQ96_09403 BWQ96_09403 BWQ96_09361 BWQ96_09361 BWQ96_09188 BWQ96_09188 BWQ96_09187 BWQ96_09187 BWQ96_09009 BWQ96_09009 BWQ96_08752 BWQ96_08752 BWQ96_08707 BWQ96_08707 BWQ96_09646 BWQ96_09646 BWQ96_08597 BWQ96_08597 BWQ96_08624 BWQ96_08624 BWQ96_08512 BWQ96_08512 BWQ96_08513 BWQ96_08513 BWQ96_08466 BWQ96_08466 BWQ96_08281 BWQ96_08281 BWQ96_08375 BWQ96_08375 BWQ96_08295 BWQ96_08295 BWQ96_08027 BWQ96_08027 BWQ96_08001 BWQ96_08001 BWQ96_07894 BWQ96_07894 BWQ96_08821 BWQ96_08821 BWQ96_08787 BWQ96_08787 BWQ96_07806 BWQ96_07806 BWQ96_07707 BWQ96_07707 BWQ96_00412 BWQ96_00412 BWQ96_00660 BWQ96_00660 BWQ96_00149 BWQ96_00149 BWQ96_00128 BWQ96_00128 BWQ96_00743 BWQ96_00743 BWQ96_00468 BWQ96_00468 BWQ96_00431 BWQ96_00431 BWQ96_00421 BWQ96_00421 BWQ96_00778 BWQ96_00778 BWQ96_00380 BWQ96_00380 BWQ96_01749 BWQ96_01749 BWQ96_00621 BWQ96_00621 BWQ96_00586 BWQ96_00586 BWQ96_00699 BWQ96_00699 BWQ96_00794 BWQ96_00794 BWQ96_00754 BWQ96_00754 BWQ96_00923 BWQ96_00923 BWQ96_01790 BWQ96_01790 BWQ96_01314 BWQ96_01314 BWQ96_01113 BWQ96_01113 BWQ96_01313 BWQ96_01313 BWQ96_01435 BWQ96_01435 BWQ96_01661 BWQ96_01661 BWQ96_02422 BWQ96_02422 BWQ96_02562 BWQ96_02562 BWQ96_01812 BWQ96_01812 BWQ96_01467 BWQ96_01467 BWQ96_01755 BWQ96_01755 BWQ96_01624 BWQ96_01624 BWQ96_02009 BWQ96_02009 BWQ96_01904 BWQ96_01904 BWQ96_01849 BWQ96_01849 BWQ96_02188 BWQ96_02188 BWQ96_01821 BWQ96_01821 BWQ96_01958 BWQ96_01958 BWQ96_02125 BWQ96_02125 BWQ96_02479 BWQ96_02479 BWQ96_02055 BWQ96_02055 BWQ96_02027 BWQ96_02027 BWQ96_02061 BWQ96_02061 BWQ96_02671 BWQ96_02671 BWQ96_02847 BWQ96_02847 LSM1 LSM1 BWQ96_02470 BWQ96_02470 BWQ96_02940 BWQ96_02940 BWQ96_02406 BWQ96_02406 BWQ96_03002 BWQ96_03002 BWQ96_02730 BWQ96_02730 BWQ96_03265 BWQ96_03265 BWQ96_03859 BWQ96_03859 BWQ96_02951 BWQ96_02951 BWQ96_02989 BWQ96_02989 BWQ96_03563 BWQ96_03563 BWQ96_03533 BWQ96_03533 BWQ96_03090 BWQ96_03090 BWQ96_03626 BWQ96_03626 BWQ96_03048 BWQ96_03048 BWQ96_03326 BWQ96_03326 BWQ96_03422 BWQ96_03422 BWQ96_03742 BWQ96_03742 BWQ96_03264 BWQ96_03264 BWQ96_03430 BWQ96_03430 BWQ96_03437 BWQ96_03437 BWQ96_03644 BWQ96_03644 BWQ96_03618 BWQ96_03618 BWQ96_03691 BWQ96_03691 BWQ96_03733 BWQ96_03733 BWQ96_04233 BWQ96_04233 BWQ96_03838 BWQ96_03838 BWQ96_04018 BWQ96_04018 BWQ96_04009 BWQ96_04009 BWQ96_04125 BWQ96_04125 BWQ96_04277 BWQ96_04277 BWQ96_04308 BWQ96_04308 BWQ96_04522 BWQ96_04522 BWQ96_04787 BWQ96_04787 BWQ96_04836 BWQ96_04836 BWQ96_04874 BWQ96_04874 BWQ96_04934 BWQ96_04934 BWQ96_05130 BWQ96_05130 BWQ96_05316 BWQ96_05316 BWQ96_05309 BWQ96_05309
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BWQ96_07687FACT complex subunit SPT16. (1100 aa)
BWQ96_05735RBR-type E3 ubiquitin transferase. (303 aa)
BWQ96_05418U3 small nucleolar RNA-associated protein 15-like. (522 aa)
BWQ96_05488Membrane-bound transcription factor site-2 protease. (535 aa)
BWQ96_05661Serine/threonine-protein kinase 19. (266 aa)
BWQ96_06619Plus3 domain-containing protein. (428 aa)
BWQ96_05878Exosome complex component RRP4. (345 aa)
BWQ96_06033Myocyte-specific enhancer factor 2D. (82 aa)
BWQ96_06122Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (621 aa)
BWQ96_06196Exosome complex component rrp45. (412 aa)
BWQ96_06381Protein kinase C delta type. (559 aa)
BWQ96_06456Cyclin-dependent kinase C-1; Belongs to the protein kinase superfamily. (359 aa)
BWQ96_06446CDK-activating kinase assembly factor MAT1. (256 aa)
BWQ96_06436RNA polymerase sigma factor SigA. (350 aa)
BWQ96_07461DNA repair helicase XPD. (782 aa)
BWQ96_06484Uncharacterized protein. (214 aa)
BWQ96_06574Vitamin B12-binding protein. (317 aa)
BWQ96_06558Exosome complex component rrp4. (198 aa)
BWQ96_0657130S ribosomal protein S4. (268 aa)
BWQ96_06573Nuclear transcription factor Y subunit B-1. (124 aa)
BWQ96_06659DNA-binding protein BIN4. (291 aa)
BWQ96_06774Golgin candidate 5. (675 aa)
BWQ96_06887CCR4-NOT transcription complex subunit 1. (760 aa)
BWQ96_07047Uncharacterized protein. (151 aa)
BWQ96_07107Putative exosome complex component rrp40. (249 aa)
BWQ96_07325Protein FIZZY-RELATED 2. (513 aa)
BWQ96_10654General negative regulator of transcription subunit 1. (205 aa)
BWQ96_10653CCR4-NOT transcription complex subunit 1. (343 aa)
BWQ96_10582CCR4-NOT transcription complex subunit 1. (176 aa)
BWQ96_10464GTP-binding protein TypA/BipA-like. (659 aa)
BWQ96_10404Septum-promoting GTP-binding protein 1. (225 aa)
BWQ96_10095Exosome complex component rrp4. (201 aa)
BWQ96_09967Multiprotein-bridging factor 1b. (127 aa)
BWQ96_09879Exosome complex component rrp4. (201 aa)
BWQ96_09810Eukaryotic translation initiation factor 5A. (153 aa)
BWQ96_09613CCR4-NOT transcription complex subunit 1. (258 aa)
BWQ96_09513Membralin. (369 aa)
BWQ96_09414Exosome complex component rrp4. (200 aa)
BWQ96_09403Plexin-D1. (1761 aa)
BWQ96_09361Transcription initiation factor TFIID subunit 11. (200 aa)
BWQ96_09188CCR4-NOT transcription complex subunit 1. (430 aa)
BWQ96_09187CCR4-NOT transcription complex subunit 1. (331 aa)
BWQ96_09009Nuclear transcription factor Y subunit C-2. (295 aa)
BWQ96_08752Trafficking protein particle complex subunit 12. (330 aa)
BWQ96_08707THO complex subunit 5-like. (598 aa)
BWQ96_09646Radical S-adenosyl methionine domain-containing protein 2. (245 aa)
BWQ96_08597Protein FAM98B. (298 aa)
BWQ96_08624Exosome complex exonuclease RRP42. (296 aa)
BWQ96_08512CCR4-NOT transcription complex subunit 1. (229 aa)
BWQ96_08513CCR4-NOT transcription complex subunit 1. (543 aa)
BWQ96_08466Calcium-binding protein 39-like. (347 aa)
BWQ96_08281Anaphase-promoting complex subunit 6. (563 aa)
BWQ96_08375Protein PAM68, chloroplastic. (200 aa)
BWQ96_08295RNA polymerase sigma factor SigA. (361 aa)
BWQ96_08027Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (219 aa)
BWQ96_08001Exosome complex component RRP43. (295 aa)
BWQ96_07894Protein transport protein SEC13-like; Belongs to the WD repeat SEC13 family. (355 aa)
BWQ96_08821Dual specificity phosphatase Cdc25. (134 aa)
BWQ96_08787GTP-binding protein SAR2; Belongs to the small GTPase superfamily. SAR1 family. (189 aa)
BWQ96_07806La-related protein 4. (236 aa)
BWQ96_07707Myocyte-specific enhancer factor 2D. (666 aa)
BWQ96_00412JmjC domain-containing protein 8. (424 aa)
BWQ96_00660Myocyte-specific enhancer factor 2D. (628 aa)
BWQ96_00149Putative elongation factor TypA-like SVR3, chloroplastic. (668 aa)
BWQ96_00128Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (684 aa)
BWQ96_0074360S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (105 aa)
BWQ96_0046840S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (192 aa)
BWQ96_00431Exosome complex component rrp4. (201 aa)
BWQ96_00421Target of rapamycin complex 1 subunit KOG1. (1786 aa)
BWQ96_00778Exosome complex component rrp4. (92 aa)
BWQ96_00380Protein kinase C iota type. (848 aa)
BWQ96_01749Cell division cycle protein 27-like. (733 aa)
BWQ96_00621Armadillo repeat-containing protein LFR. (730 aa)
BWQ96_00586Uncharacterized protein. (660 aa)
BWQ96_00699Histone-lysine N-methyltransferase trithorax. (882 aa)
BWQ96_00794Akirin-1. (203 aa)
BWQ96_00754mRNA-decapping enzyme-like protein. (727 aa)
BWQ96_00923Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (720 aa)
BWQ96_01790Homeobox protein HD-5. (693 aa)
BWQ96_01314DUF3819 domain-containing protein. (280 aa)
BWQ96_01113RNA_ligase domain-containing protein. (1045 aa)
BWQ96_01313CCR4-NOT transcription complex subunit 1. (435 aa)
BWQ96_01435Guanine nucleotide-binding protein subunit beta-2-like 1. (324 aa)
BWQ96_01661Transcription elongation factor SPT6-like. (1978 aa)
BWQ96_02422AT-rich interactive domain-containing protein 2. (937 aa)
BWQ96_02562Dr1-associated corepressor. (223 aa)
BWQ96_01812Uncharacterized protein. (398 aa)
BWQ96_01467Myocyte-specific enhancer factor 2D. (394 aa)
BWQ96_01755Nuclear factor related to kappa-B-binding protein. (486 aa)
BWQ96_01624Putative AAA domain-containing protein. (765 aa)
BWQ96_02009PAB-dependent poly(A)-specific ribonuclease subunit PAN2. (1236 aa)
BWQ96_01904MOB kinase activator-like 1-like. (213 aa)
BWQ96_01849Protein kinase C alpha type. (647 aa)
BWQ96_02188Uncharacterized protein. (366 aa)
BWQ96_01821Actin-interacting protein 1. (606 aa)
BWQ96_01958Transcription initiation factor TFIID subunit 8. (308 aa)
BWQ96_02125Cell division cycle protein 20-like. (526 aa)
BWQ96_02479WD repeat-containing protein 75. (977 aa)
BWQ96_02055Uncharacterized protein. (335 aa)
BWQ96_02027E2F transcription factor-like E2FE. (615 aa)
BWQ96_02061Carbon catabolite repressor protein 4-like. (597 aa)
BWQ96_02671Cyclin-T1-5; Belongs to the cyclin family. (342 aa)
BWQ96_02847Transcription initiation factor TFIID subunit 9. (326 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (144 aa)
BWQ96_02470Protein ORANGE-LIKE, chloroplastic. (184 aa)
BWQ96_02940E2F-associated phosphoprotein. (181 aa)
BWQ96_02406Cell division cycle protein 73. (468 aa)
BWQ96_03002Transcriptional adapter 2-beta. (1314 aa)
BWQ96_02730PITH domain-containing protein 1. (212 aa)
BWQ96_03265Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (497 aa)
BWQ96_03859Uncharacterized protein. (159 aa)
BWQ96_02951Cyclin-dependent kinase C-1; Belongs to the protein kinase superfamily. (391 aa)
BWQ96_02989Protein Dr1. (141 aa)
BWQ96_03563Transcriptional adapter 2. (383 aa)
BWQ96_03533Regulator of nonsense transcripts UPF3. (424 aa)
BWQ96_03090CCR4-NOT transcription complex subunit 7. (301 aa)
BWQ96_03626Transcription initiation factor TFIID subunit 6. (539 aa)
BWQ96_03048Uncharacterized protein. (287 aa)
BWQ96_03326CCR4-NOT transcription complex subunit 3. (566 aa)
BWQ96_03422DNA repair helicase XPD. (783 aa)
BWQ96_03742DET1-like. (663 aa)
BWQ96_03264mRNA decapping complex subunit 2. (479 aa)
BWQ96_03430Homogentisate solanesyltransferase, chloroplastic. (267 aa)
BWQ96_03437Transcription elongation factor SPT4. (124 aa)
BWQ96_03644Transcription initiation factor TFIID subunit 6. (369 aa)
BWQ96_03618Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (77 aa)
BWQ96_03691RNA polymerase sigma factor SigA. (604 aa)
BWQ96_03733RBR-type E3 ubiquitin transferase. (479 aa)
BWQ96_04233Exosome complex component RRP4. (345 aa)
BWQ96_03838CCR4-NOT transcription complex subunit 1. (2377 aa)
BWQ96_04018WD_REPEATS_REGION domain-containing protein. (1764 aa)
BWQ96_04009Uncharacterized protein. (430 aa)
BWQ96_04125PAB-dependent poly(A)-specific ribonuclease subunit PAN3. (504 aa)
BWQ96_04277CCHC-type domain-containing protein. (162 aa)
BWQ96_04308RAC-beta serine/threonine-protein kinase. (537 aa)
BWQ96_04522Uncharacterized protein. (205 aa)
BWQ96_04787Exosome complex component RRP4. (292 aa)
BWQ96_048362',5'-phosphodiesterase 12. (467 aa)
BWQ96_04874Myocyte-specific enhancer factor 2D-like. (630 aa)
BWQ96_04934ATPase family AAA domain-containing protein 2. (1438 aa)
BWQ96_05130Reticulocyte-binding protein 2-like. (902 aa)
BWQ96_05316Uncharacterized protein. (374 aa)
BWQ96_05309Anaphase-promoting complex subunit 11. (87 aa)
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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