STRINGSTRING
BWQ96_00804 BWQ96_00804 BWQ96_01054 BWQ96_01054 BWQ96_01055 BWQ96_01055 BWQ96_02562 BWQ96_02562 BWQ96_01715 BWQ96_01715 BWQ96_09009 BWQ96_09009 BWQ96_09361 BWQ96_09361 BWQ96_01958 BWQ96_01958 BWQ96_02489 BWQ96_02489 BWQ96_02847 BWQ96_02847 BWQ96_02488 BWQ96_02488 BWQ96_02989 BWQ96_02989 BWQ96_03626 BWQ96_03626 BWQ96_03644 BWQ96_03644 BWQ96_03504 BWQ96_03504 BWQ96_06489 BWQ96_06489 BWQ96_06490 BWQ96_06490 BWQ96_06573 BWQ96_06573 BWQ96_07781 BWQ96_07781 BWQ96_00865 BWQ96_00865
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BWQ96_00804Histone H3. (171 aa)
BWQ96_01054Histone H2B; Belongs to the histone H2B family. (126 aa)
BWQ96_01055Histone H2A; Belongs to the histone H2A family. (124 aa)
BWQ96_02562Dr1-associated corepressor. (223 aa)
BWQ96_01715Histone H3; Belongs to the histone H3 family. (136 aa)
BWQ96_09009Nuclear transcription factor Y subunit C-2. (295 aa)
BWQ96_09361Transcription initiation factor TFIID subunit 11. (200 aa)
BWQ96_01958Transcription initiation factor TFIID subunit 8. (308 aa)
BWQ96_02489Histone H2A; Belongs to the histone H2A family. (122 aa)
BWQ96_02847Transcription initiation factor TFIID subunit 9. (326 aa)
BWQ96_02488Histone H2B; Belongs to the histone H2B family. (124 aa)
BWQ96_02989Protein Dr1. (141 aa)
BWQ96_03626Transcription initiation factor TFIID subunit 6. (539 aa)
BWQ96_03644Transcription initiation factor TFIID subunit 6. (369 aa)
BWQ96_03504Transcription initiation factor TFIID subunit 13. (118 aa)
BWQ96_06489Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
BWQ96_06490Histone H3; Belongs to the histone H3 family. (136 aa)
BWQ96_06573Nuclear transcription factor Y subunit B-1. (124 aa)
BWQ96_07781Transcription initiation factor TFIID subunit 12. (134 aa)
BWQ96_00865Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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