STRINGSTRING
PHZ_c1509 PHZ_c1509 trbL trbL trbI trbI virB3 virB3 virB6 virB6 virB8 virB8 virB10 virB10 virD4 virD4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PHZ_c1509virD4, type IV secretion protein. (658 aa)
trbLConjugal transfer protein. (388 aa)
trbIConjugal transfer protein. (381 aa)
virB3Type IV secretory pathway, VirB3 component. (112 aa)
virB6Type IV secretory pathway, VirB6 component. (312 aa)
virB8Type IV secretory pathway, component VirB8. (226 aa)
virB10Type IV secretory pathway, VirB10 component. (346 aa)
virD4Type IV secretory pathway, VirD4 component. (594 aa)
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.