STRINGSTRING
Aasi_0820 Aasi_0820 Aasi_0999 Aasi_0999 Aasi_1160 Aasi_1160 Aasi_1285 Aasi_1285 Aasi_1304 Aasi_1304 Aasi_1443 Aasi_1443 Aasi_1629 Aasi_1629
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Aasi_0820Hypothetical protein; PFAM: PF04389, Peptidase M28. (1212 aa)
Aasi_0999Hypothetical protein; PFAM: PF01609, Transposase, IS4-like. (2272 aa)
Aasi_1160Hypothetical protein; PROSITE: PS01150, NADH dehydrogenase (ubiquinone), 20 kDa subunit; PANTHER: PTHR11995:SF2, NADH dehydrogenase (ubiquinone), 20 kDa subunit;PTHR11995, [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB; PFAM: PF01058, NADH ubiquinone oxidoreductase, 20 kDa subunit; TIGRFAMS: TIGR01957, NADH dehydrogenase (ubiquinone), 20 kDa subunit. (2303 aa)
Aasi_1285Hypothetical protein; PANTHER: PTHR11933, tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: PF03054, tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; GENE3D: G3DSA:3.40.50.620, Rossmann-like alpha/beta/alpha sandwich fold; TIGRFAMS: TIGR00420, tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase. (222 aa)
Aasi_1304Hypothetical protein; PFAM: PF08238, Sel1-like;PF04564, U box; GENE3D: G3DSA:1.25.40.10, Tetratricopeptide-like helical;G3DSA:3.30.40.10, Zinc finger, RING/FYVE/PHD-type; SMART: SM00671, Sel1-like;SM00504, U box. (1404 aa)
Aasi_1443Hypothetical protein. (1053 aa)
Aasi_1629Hypothetical protein. (2279 aa)
Your Current Organism:
Amoebophilus asiaticus
NCBI taxonomy Id: 452471
Other names: C. Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus str. 5a2, Candidatus Amoebophilus asiaticus strain 5a2
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