STRINGSTRING
Oter_0174 Oter_0174 Oter_0288 Oter_0288 Oter_0289 Oter_0289 Oter_0290 Oter_0290 Oter_0850 Oter_0850 Oter_0892 Oter_0892 Oter_1565 Oter_1565 Oter_1571 Oter_1571 Oter_1596 Oter_1596 Oter_1597 Oter_1597 Oter_1772 Oter_1772 Oter_1773 Oter_1773 Oter_1774 Oter_1774 Oter_2106 Oter_2106 Oter_2108 Oter_2108 Oter_2251 Oter_2251 Oter_2488 Oter_2488 Oter_2710 Oter_2710 Oter_2734 Oter_2734 Oter_2747 Oter_2747 Oter_2748 Oter_2748 Oter_2749 Oter_2749 Oter_2750 Oter_2750 Oter_2751 Oter_2751 Oter_2752 Oter_2752 Oter_2753 Oter_2753 Oter_2754 Oter_2754 Oter_2755 Oter_2755 Oter_2756 Oter_2756 Oter_2757 Oter_2757 Oter_2758 Oter_2758 Oter_2759 Oter_2759 Oter_2760 Oter_2760 Oter_2761 Oter_2761 Oter_2762 Oter_2762 Oter_2763 Oter_2763 Oter_2764 Oter_2764 Oter_2765 Oter_2765 Oter_2766 Oter_2766 Oter_2767 Oter_2767 Oter_2769 Oter_2769 Oter_2770 Oter_2770 Oter_2771 Oter_2771 Oter_2772 Oter_2772 Oter_2773 Oter_2773 Oter_2774 Oter_2774 Oter_2775 Oter_2775 Oter_2776 Oter_2776 recR recR Oter_2890 Oter_2890 Oter_2971 Oter_2971 Oter_3240 Oter_3240 Oter_3241 Oter_3241 Oter_3242 Oter_3242 Oter_3243 Oter_3243 Oter_3244 Oter_3244 Oter_3245 Oter_3245 Oter_3246 Oter_3246 Oter_3289 Oter_3289 Oter_3440 Oter_3440 Oter_3443 Oter_3443 Oter_3763 Oter_3763 Oter_3806 Oter_3806 Oter_3871 Oter_3871 Oter_3872 Oter_3872 gmd gmd gmd-2 gmd-2 Oter_3946 Oter_3946 Oter_3964 Oter_3964 Oter_3973 Oter_3973 Oter_3975 Oter_3975 Oter_3992 Oter_3992 Oter_3993 Oter_3993 Oter_3994 Oter_3994 Oter_3996 Oter_3996 Oter_3997 Oter_3997 fcl fcl gmd-3 gmd-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
Oter_0174PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pvi:Cvib_0628 NAD-dependent epimerase/dehydratase. (308 aa)
Oter_0288PFAM: glycosyl transferase family 2; KEGG: rso:RSc0687 probable dTDP-rhamnosyl transferase RfbF protein. (329 aa)
Oter_0289PFAM: polysaccharide biosynthesis protein; KEGG: bja:blr2242 hypothetical protein. (413 aa)
Oter_0290PFAM: glycosyl transferase group 1; KEGG: dge:Dgeo_2668 glycosyl transferase, group 1. (377 aa)
Oter_0850dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (314 aa)
Oter_0892PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ppd:Ppro_3406 NAD-dependent epimerase/dehydratase. (324 aa)
Oter_1565KEGG: sus:Acid_6549 nucleotidyl transferase. (281 aa)
Oter_1571TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: ret:RHE_CH01358 putative teichoic acid biosynthesis, UDP-N-acetyl-D-mannosaminuronic acid transferase protein; Belongs to the glycosyltransferase 26 family. (263 aa)
Oter_1596PFAM: polysaccharide export protein; KEGG: sfu:Sfum_3319 polysaccharide export protein. (206 aa)
Oter_1597Capsular exopolysaccharide family; KEGG: vco:VC0395_A0461 putative exopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein. (739 aa)
Oter_1772PFAM: glycosyl transferase family 2; KEGG: gvi:glr3787 hypothetical protein. (264 aa)
Oter_1773PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1949 glycosyl transferase family 2. (303 aa)
Oter_1774KEGG: cya:CYA_0239 bacterial sugar transferase family protein; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase. (483 aa)
Oter_2106KEGG: mxa:MXAN_1025 capsular exopolysaccharide family protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein. (724 aa)
Oter_2108KEGG: cpy:Cphy_3271 putative UDP-N-acetylglucosamine diphosphorylase. (230 aa)
Oter_2251PFAM: Nucleotidyl transferase; KEGG: sat:SYN_01031 mannose-1-phosphate guanylyltransferase. (360 aa)
Oter_2488PFAM: polysaccharide export protein; KEGG: rru:Rru_A1487 polysaccharide export protein. (196 aa)
Oter_2710PFAM: glycosyl transferase group 1; KEGG: bbr:BB0881 putative glycosyltransferase. (367 aa)
Oter_2734KEGG: osa:4352147 Os12g0443600; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (452 aa)
Oter_2747TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: dvl:Dvul_2655 sugar transferase. (459 aa)
Oter_2748PFAM: glycosyl transferase group 1; KEGG: mca:MCA1168 colanic acid biosynthesis glycosyl transferase, putative. (402 aa)
Oter_2749PFAM: glycosyl transferase family 2; KEGG: ava:Ava_3875 glycosyl transferase, family 2. (288 aa)
Oter_2750PFAM: O-antigen polymerase; KEGG: mca:MCA1173 hypothetical protein. (489 aa)
Oter_2751PFAM: glycosyl transferase group 1; KEGG: syn:slr1077 hypothetical protein. (384 aa)
Oter_2752PFAM: transferase hexapeptide repeat containing protein; KEGG: esa:ESA_01164 hypothetical protein. (192 aa)
Oter_2753PFAM: glycosyl transferase group 1; KEGG: mgm:Mmc1_2420 glycosyl transferase, group 1. (388 aa)
Oter_2754PFAM: acyltransferase 3; KEGG: bam:Bamb_3527 acyltransferase 3. (362 aa)
Oter_2755KEGG: rle:RL1207 hypothetical protein. (292 aa)
Oter_2756Hypothetical protein; KEGG: mex:Mext_0987 polysaccharide biosynthesis protein. (513 aa)
Oter_2757KEGG: mgm:Mmc1_2428 hypothetical protein. (451 aa)
Oter_2758KEGG: afw:Anae109_4439 hypothetical protein. (229 aa)
Oter_2759PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_C1281 putative glycosyl transferase. (348 aa)
Oter_2760Hypothetical protein; KEGG: mgm:Mmc1_2429 glycosyl transferase, group 1. (413 aa)
Oter_2761PFAM: glycosyl transferase group 1; KEGG: ana:alr5237 probable glycosyl transferase. (419 aa)
Oter_2762PFAM: acyltransferase 3; KEGG: xcv:XCVd0126 putative membrane-associated acetyltransferase. (354 aa)
Oter_2763PFAM: glycosyl transferase family 2; KEGG: pdi:BDI_2213 glycosyltransferase family 2. (324 aa)
Oter_2764KEGG: acr:Acry_0874 hypothetical protein. (269 aa)
Oter_2765PFAM: glycosyl transferase family 2; KEGG: ava:Ava_3874 glycosyl transferase, family 2. (626 aa)
Oter_2766PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_4616 glycosyl transferase family protein. (413 aa)
Oter_2767PFAM: glycosyl transferase family 2; KEGG: sal:Sala_2676 glycosyl transferase, family 2. (303 aa)
Oter_2769PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: tpt:Tpet_0172 glycosyl transferase, family 2. (275 aa)
Oter_2770PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_2107 ABC transporter related. (418 aa)
Oter_2771PFAM: ABC-2 type transporter; KEGG: syn:slr0977 putative O-antigen export system permease protein, ABC-2 type transporter permease protein. (277 aa)
Oter_2772PFAM: WxcM domain protein domain protein; KEGG: lbl:LBL_1230 sugar isomerase. (156 aa)
Oter_2773PFAM: glycosyl transferase group 1; KEGG: chu:CHU_0894 A-glycosyltransferase, glycosyltransferase family 4 protein. (385 aa)
Oter_2774TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: gvi:gll3753 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein. (202 aa)
Oter_2775PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: afw:Anae109_1782 3-beta hydroxysteroid dehydrogenase/isomerase. (310 aa)
Oter_2776Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (102 aa)
recRRecombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (198 aa)
Oter_2890Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mes:Meso_3973 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (391 aa)
Oter_2971TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bay:RBAM_036080 GalE; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (336 aa)
Oter_3240TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: fjo:Fjoh_4994 undecaprenyl-phosphate galactose phosphotransferase. (467 aa)
Oter_3241KEGG: nha:Nham_3412 hypothetical protein. (427 aa)
Oter_3242PFAM: polysaccharide export protein; KEGG: pol:Bpro_1877 polysaccharide export protein. (212 aa)
Oter_3243TIGRFAM: capsular exopolysaccharide family; KEGG: dol:Dole_1657 non-specific protein-tyrosine kinase. (722 aa)
Oter_3244PFAM: O-antigen polymerase; KEGG: pla:Plav_1908 O-antigen polymerase. (501 aa)
Oter_3245PFAM: ABC-2 type transporter; KEGG: sat:SYN_02655 ABC-type polysaccharide/polyol phosphate export systems, permease component. (290 aa)
Oter_3246PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fps:FP1269 probable ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (435 aa)
Oter_3289TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ana:all4713 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (330 aa)
Oter_3440PFAM: O-antigen polymerase; KEGG: pat:Patl_1077 O-antigen polymerase. (508 aa)
Oter_3443TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: cpy:Cphy_3542 undecaprenyl-phosphate glucose phosphotransferase. (471 aa)
Oter_3763TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mxa:MXAN_2922 bacterial sugar transferase. (472 aa)
Oter_3806PFAM: Nucleotidyl transferase; KEGG: sru:SRU_0567 mannose-1-phosphate guanylyltransferase. (355 aa)
Oter_3871PFAM: polysaccharide export protein; KEGG: mca:MCA0148 capsular polysaccharide export protein, putative. (214 aa)
Oter_3872Capsular exopolysaccharide family; KEGG: dol:Dole_1657 non-specific protein-tyrosine kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein. (720 aa)
gmdNAD-dependent epimerase/dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (325 aa)
gmd-2GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (328 aa)
Oter_3946PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_4096 ABC-2 type transporter. (274 aa)
Oter_3964PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfo:Pfl_4048 ABC transporter-like. (416 aa)
Oter_3973PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: bch:Bcen2424_0878 glycosyl transferase, family 2. (1275 aa)
Oter_3975PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sus:Acid_0574 NAD-dependent epimerase/dehydratase. (324 aa)
Oter_3992dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (181 aa)
Oter_3993dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (292 aa)
Oter_3994TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ajs:Ajs_0537 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (355 aa)
Oter_3996Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (308 aa)
Oter_3997PFAM: glycosyl transferase family 2; KEGG: gsu:GSU3023 glycosyl transferase, group 1/2 family protein. (327 aa)
fclNAD-dependent epimerase/dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (311 aa)
gmd-3GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (338 aa)
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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