STRINGSTRING
Oter_0327 Oter_0327 Oter_0345 Oter_0345 Oter_0375 Oter_0375 Oter_1101 Oter_1101 Oter_1159 Oter_1159 Oter_1369 Oter_1369 Oter_1999 Oter_1999 Oter_2047 Oter_2047 Oter_2208 Oter_2208 Oter_2227 Oter_2227 Oter_2268 Oter_2268 Oter_3061 Oter_3061 Oter_3237 Oter_3237 Oter_4314 Oter_4314 Oter_4315 Oter_4315 Oter_4316 Oter_4316 Oter_4344 Oter_4344 Oter_4610 Oter_4610
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Oter_0327Alpha-N-arabinofuranosidase; KEGG: scl:sce4592 alpha-L-arabinofuranosidase precursor; PFAM: glycoside hydrolase family 62; Immunoglobulin I-set domain protein; SMART: Immunoglobulin subtype. (1221 aa)
Oter_0345PFAM: putative esterase; KEGG: sus:Acid_2103 putative esterase. (305 aa)
Oter_0375Alpha-N-arabinofuranosidase; PFAM: glycoside hydrolase family 43; KEGG: afm:AFUA_8G04710 xylosidase, putative; Belongs to the glycosyl hydrolase 43 family. (320 aa)
Oter_1101Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; Carbohydrate-binding family 9; KEGG: sus:Acid_4394 endo-1,4-beta-xylanase. (1018 aa)
Oter_1159PFAM: glycosyl hydrolase 53 domain protein; KEGG: bch:Bcen2424_3290 arabinogalactan endo-1,4-beta-galactosidase. (373 aa)
Oter_1369KEGG: ccr:CC_0543 hypothetical protein. (868 aa)
Oter_1999PFAM: Immunoglobulin I-set domain protein; Immunoglobulin V-set domain protein; SMART: Immunoglobulin C2 type; Immunoglobulin subtype; KEGG: sde:Sde_1755 hypothetical protein. (1362 aa)
Oter_2047PFAM: glycosyl hydrolase 53 domain protein; KEGG: bch:Bcen2424_3290 arabinogalactan endo-1,4-beta-galactosidase. (377 aa)
Oter_2208TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: Ig family protein; Rhamnogalacturonase B; KEGG: sma:SAV2108 rhamnogalacturonase B precursor. (1869 aa)
Oter_2227Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: sus:Acid_2681 endo-1,4-beta-xylanase. (382 aa)
Oter_2268KEGG: chu:CHU_1238 CHU large protein; beta-xylosidase/endoglucanase. (615 aa)
Oter_3061PFAM: lipolytic protein G-D-S-L family; KEGG: aba:Acid345_0964 lipolytic enzyme, G-D-S-L. (415 aa)
Oter_3237PFAM: glycoside hydrolase family 62; glycoside hydrolase family 43; SMART: Immunoglobulin subtype; KEGG: scl:sce4592 alpha-L-arabinofuranosidase precursor. (1195 aa)
Oter_4314PFAM: glycoside hydrolase family 8; KEGG: scl:sce3034 endo-1,4-beta-xylanase. (412 aa)
Oter_4315PFAM: glycoside hydrolase family 8; KEGG: scl:sce3034 endo-1,4-beta-xylanase. (445 aa)
Oter_4316Alpha-glucuronidase; PFAM: glycoside hydrolase family 67; glycosyl hydrolase 67 C-teriminal domain protein; Glycosyl hydrolase 67 middle domain protein; KEGG: xcv:XCV4333 alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. (730 aa)
Oter_4344KEGG: sde:Sde_1755 hypothetical protein. (966 aa)
Oter_4610PFAM: glycoside hydrolase family 10; Immunoglobulin I-set domain protein; Immunoglobulin domain protein; SMART: Immunoglobulin C2 type; Immunoglobulin subtype; KEGG: xcb:XC_4210 xylanase. (721 aa)
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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