STRINGSTRING
Oter_3242 Oter_3242 Oter_2488 Oter_2488 Oter_1596 Oter_1596 Oter_3871 Oter_3871
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Oter_3242PFAM: polysaccharide export protein; KEGG: pol:Bpro_1877 polysaccharide export protein. (212 aa)
Oter_2488PFAM: polysaccharide export protein; KEGG: rru:Rru_A1487 polysaccharide export protein. (196 aa)
Oter_1596PFAM: polysaccharide export protein; KEGG: sfu:Sfum_3319 polysaccharide export protein. (206 aa)
Oter_3871PFAM: polysaccharide export protein; KEGG: mca:MCA0148 capsular polysaccharide export protein, putative. (214 aa)
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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