STRINGSTRING
Oter_3964 Oter_3964 Oter_3246 Oter_3246 Oter_2770 Oter_2770
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Oter_3964PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfo:Pfl_4048 ABC transporter-like. (416 aa)
Oter_3246PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fps:FP1269 probable ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (435 aa)
Oter_2770PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_2107 ABC transporter related. (418 aa)
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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