STRINGSTRING
Oter_4527 Oter_4527 Oter_2541 Oter_2541 Oter_3506 Oter_3506
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Oter_4527PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: aha:AHA_0864 ATP-dependent helicase HepA. (982 aa)
Oter_2541Non-specific serine/threonine protein kinase; KEGG: scl:sce2990 hypothetical protein; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases. (922 aa)
Oter_3506Non-specific serine/threonine protein kinase; KEGG: mxa:MXAN_5351 SNF2/helicase domain protein; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases. (848 aa)
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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