STRINGSTRING
Oter_0242 Oter_0242 Oter_2347 Oter_2347 Oter_3325 Oter_3325 Oter_3906 Oter_3906 Oter_0401 Oter_0401
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Oter_0242PFAM: MotA/TolQ/ExbB proton channel; KEGG: pcu:pc1547 putative biopolymer transport protein ExbB. (218 aa)
Oter_2347PFAM: MotA/TolQ/ExbB proton channel; KEGG: fnu:FN1312 biopolymer transport ExbB protein. (221 aa)
Oter_3325PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_3629 TolQ protein. (234 aa)
Oter_3906PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A2483 putative biopolymer transport ExbB-like transmembrane protein. (196 aa)
Oter_0401PFAM: MotA/TolQ/ExbB proton channel; KEGG: maq:Maqu_2779 flagellar motor component. (287 aa)
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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