STRINGSTRING
Oter_2345 Oter_2345 Oter_2346 Oter_2346 Oter_3324 Oter_3324 Oter_3905 Oter_3905
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Oter_2345PFAM: Biopolymer transport protein ExbD/TolR; KEGG: amr:AM1_B0121 biopolymer transport protein ExbD/TolR, putative. (146 aa)
Oter_2346PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ava:Ava_2305 biopolymer transport protein ExbD/TolR. (145 aa)
Oter_3324PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nar:Saro_1015 biopolymer transport protein ExbD/TolR. (142 aa)
Oter_3905PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mca:MCA0632 biopolymer transport protein, ExbD/TolR family. (133 aa)
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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