STRINGSTRING
Oter_0898 Oter_0898 Oter_1988 Oter_1988 Oter_2196 Oter_2196 Oter_2881 Oter_2881 Oter_2911 Oter_2911 Oter_3513 Oter_3513 Oter_4563 Oter_4563
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Oter_0898PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rba:RB6199 dehydrogenase homolog. (353 aa)
Oter_1988PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bcl:ABC3277 dehydrogenase. (391 aa)
Oter_2196PFAM: oxidoreductase domain protein; KEGG: pdi:BDI_1872 putative dehydrogenase. (444 aa)
Oter_2881PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sus:Acid_7126 oxidoreductase domain protein. (381 aa)
Oter_2911PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sma:SAV7022 oxidoreductase. (366 aa)
Oter_3513PFAM: oxidoreductase domain protein; KEGG: bth:BT_3472 putative hydrogenase. (463 aa)
Oter_4563PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ani:AN7156.2 hypothetical protein. (496 aa)
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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