(4 nodes) Thiamine pyrophosphate binding network (Polynucleobacter necessarius)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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filled nodes:
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Predicted Interactions

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Your Input:
	dxs	Deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (633 aa)
	Pnec_0337	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rpa:RPA4054 possible acetolactate synthase large subunit; Belongs to the TPP enzyme family. (601 aa)
	Pnec_0810	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pnu:Pnuc_1063 acetolactate synthase, large subunit, biosynthetic type. (595 aa)
	Pnec_0998	2-oxoglutarate dehydrogenase, E1 subunit; KEGG: pnu:Pnuc_0840 alpha-ketoglutarate decarboxylase; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; Transketolase central region. (956 aa)

Your Current Organism:

Polynucleobacter necessarius

NCBI taxonomy Id: 452638
Other names: P. necessarius STIR1, Polynucleobacter necessarius STIR1, Polynucleobacter necessarius subsp. necessarius STIR1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Pnec_0337	Pnec_0810	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rpa:RPA4054 possible acetolactate synthase large subunit; Belongs to the TPP enzyme family.	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pnu:Pnuc_1063 acetolactate synthase, large subunit, biosynthetic type.	0.926
Pnec_0810	Pnec_0337	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pnu:Pnuc_1063 acetolactate synthase, large subunit, biosynthetic type.	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rpa:RPA4054 possible acetolactate synthase large subunit; Belongs to the TPP enzyme family.	0.926