55 items (Sphingobium japonicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BAI94930.1	Putative protein-S-isoprenylcysteine methyltransferase. (431 aa)
	BAI95030.1	MarR-family transcriptional regulator. (334 aa)
	BAI95099.1	Ribonuclease G or E. (329 aa)
	maf	Septum formation protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (165 aa)
	BAI95141.1	ABC-type Na+ efflux pump, permease component. (396 aa)
	BAI95142.1	ABC-type transport system ATPase component. (318 aa)
	queG	Putative Fe-S protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (340 aa)
	BAI95147.1	Putative polysaccharide transporter; Membrane protein involved in the export of O-antigen and teichoic acid. (498 aa)
	BAI95419.1	Hypothetical protein. (89 aa)
	BAI95420.1	Conserved hypothetical protein; Putative secretion activating protein. (190 aa)
	BAI95660.1	Conserved hypothetical protein. (216 aa)
	BAI95740.1	Putative outer membrane protein; Opacity protein or related surface antigen. (171 aa)
	BAI95755.1	Hypothetical protein. (423 aa)
	ytfM	Outer membrane protein YtfM. (685 aa)
	BAI96113.1	Uncharacterized protein conserved in bacteria. (1389 aa)
	BAI96136.1	Hypothetical protein. (155 aa)
	BAI96137.1	Putative permease. (384 aa)
	BAI96280.1	Hypothetical protein. (206 aa)
	BAI96285.1	Tight adherence protein TadE; Flp pilus assembly protein TadG. (239 aa)
	BAI96286.1	Tight adherence protein TadE; Flp pilus assembly protein TadG. (201 aa)
	BAI96287.1	Flp pilus assembly protein TadG. (771 aa)
	BAI96288.1	Hypothetical protein. (214 aa)
	BAI96289.1	Conserved hypothetical protein; Putative membrane protein/domain. (154 aa)
	ppiD	Peptidyl-prolyl cis-trans isomerase D. (649 aa)
	BAI96928.1	Hypothetical protein. (239 aa)
	BAI96963.1	Hypothetical protein; FOG: TPR repeat. (421 aa)
	BAI97099.1	ATP synthase protein I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex. (106 aa)
	BAI97100.1	Uncharacterized protein conserved in bacteria. (133 aa)
	BAI97101.1	Hypothetical protein. (62 aa)
	BAI97102.1	Large exoprotein involved in heme utilization or adhesion. (1077 aa)
	radC-2	DNA repair protein RadC; Belongs to the UPF0758 family. (231 aa)
	BAI97202.1	Conserved hypothetical protein; Kinesin-like protein. (893 aa)
	BAI97232.1	Putative Zn-dependent protease; TPR repeat. (492 aa)
	xerD	Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (305 aa)
	BAI97235.1	Conserved hypothetical protein. (604 aa)
	BAI97236.1	Hypothetical protein. (62 aa)
	BAI97391.1	Hypothetical protein. (141 aa)
	BAI97392.1	FOG: TPR repeat. (200 aa)
	sun-2	tRNA/rRNA cytosine-C5-methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (391 aa)
	BAI97514.1	Trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain. (516 aa)
	BAI97648.1	Hypothetical protein. (238 aa)
	BAI97650.1	Hypothetical protein. (247 aa)
	BAI97667.1	Hypothetical protein. (67 aa)
	BAI97668.1	Hypothetical protein. (379 aa)
	BAI97669.1	Peptide/nickel transport system substrate-binding protein / ABC-type oligopeptide transport system, periplasmic component. (512 aa)
	BAI97670.1	Hypothetical protein. (140 aa)
	BAI97968.1	Protein involved in cellulose biosynthesis (CelD). (368 aa)
	jmjC	Transcription factor jumonji, jmjC. (286 aa)
	BAI98048.1	Putative outer membrane protein. (697 aa)
	BAI98049.1	Uncharacterized protein conserved in bacteria. (1395 aa)
	BAI98083.1	Putative integral membrane protein. (296 aa)
	BAI98134.1	Conserved hypothetical protein. (151 aa)
	BAI98135.1	Xre-family transcriptional regulator; SOS-response transcriptional repressor (RecA-mediated autopeptidase). (187 aa)
	BAI98235.1	AraC-family transcriptional regulator; AraC-type DNA-binding domain-containing protein. (276 aa)
	BAI98271.1	Conserved hypothetical protein. (100 aa)

Your Current Organism:

Sphingobium japonicum

NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAI94930.1	BAI95141.1	SJA_C1-00960	SJA_C1-03070	Putative protein-S-isoprenylcysteine methyltransferase.	ABC-type Na+ efflux pump, permease component.	0.640
BAI94930.1	BAI95147.1	SJA_C1-00960	SJA_C1-03130	Putative protein-S-isoprenylcysteine methyltransferase.	Putative polysaccharide transporter; Membrane protein involved in the export of O-antigen and teichoic acid.	0.569
BAI94930.1	BAI95660.1	SJA_C1-00960	SJA_C1-08260	Putative protein-S-isoprenylcysteine methyltransferase.	Conserved hypothetical protein.	0.558
BAI94930.1	BAI95755.1	SJA_C1-00960	SJA_C1-09210	Putative protein-S-isoprenylcysteine methyltransferase.	Hypothetical protein.	0.588
BAI94930.1	BAI96136.1	SJA_C1-00960	SJA_C1-13020	Putative protein-S-isoprenylcysteine methyltransferase.	Hypothetical protein.	0.640
BAI94930.1	BAI96280.1	SJA_C1-00960	SJA_C1-14460	Putative protein-S-isoprenylcysteine methyltransferase.	Hypothetical protein.	0.653
BAI94930.1	BAI96286.1	SJA_C1-00960	SJA_C1-14520	Putative protein-S-isoprenylcysteine methyltransferase.	Tight adherence protein TadE; Flp pilus assembly protein TadG.	0.743
BAI94930.1	BAI96287.1	SJA_C1-00960	SJA_C1-14530	Putative protein-S-isoprenylcysteine methyltransferase.	Flp pilus assembly protein TadG.	0.752
BAI94930.1	BAI96289.1	SJA_C1-00960	SJA_C1-14550	Putative protein-S-isoprenylcysteine methyltransferase.	Conserved hypothetical protein; Putative membrane protein/domain.	0.729
BAI94930.1	BAI97099.1	SJA_C1-00960	SJA_C1-22650	Putative protein-S-isoprenylcysteine methyltransferase.	ATP synthase protein I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.	0.567
BAI94930.1	BAI97102.1	SJA_C1-00960	SJA_C1-22680	Putative protein-S-isoprenylcysteine methyltransferase.	Large exoprotein involved in heme utilization or adhesion.	0.587
BAI94930.1	BAI97235.1	SJA_C1-00960	SJA_C1-24010	Putative protein-S-isoprenylcysteine methyltransferase.	Conserved hypothetical protein.	0.689
BAI94930.1	BAI97392.1	SJA_C1-00960	SJA_C1-25580	Putative protein-S-isoprenylcysteine methyltransferase.	FOG: TPR repeat.	0.453
BAI94930.1	BAI97514.1	SJA_C1-00960	SJA_C1-26800	Putative protein-S-isoprenylcysteine methyltransferase.	Trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain.	0.709
BAI94930.1	BAI97650.1	SJA_C1-00960	SJA_C1-28160	Putative protein-S-isoprenylcysteine methyltransferase.	Hypothetical protein.	0.620
BAI94930.1	BAI97668.1	SJA_C1-00960	SJA_C1-28340	Putative protein-S-isoprenylcysteine methyltransferase.	Hypothetical protein.	0.772
BAI94930.1	BAI97669.1	SJA_C1-00960	SJA_C1-28350	Putative protein-S-isoprenylcysteine methyltransferase.	Peptide/nickel transport system substrate-binding protein / ABC-type oligopeptide transport system, periplasmic component.	0.610
BAI94930.1	BAI97968.1	SJA_C1-00960	SJA_C1-31340	Putative protein-S-isoprenylcysteine methyltransferase.	Protein involved in cellulose biosynthesis (CelD).	0.530
BAI94930.1	BAI98083.1	SJA_C1-00960	SJA_C1-32490	Putative protein-S-isoprenylcysteine methyltransferase.	Putative integral membrane protein.	0.764
BAI94930.1	BAI98135.1	SJA_C1-00960	SJA_C1-33010	Putative protein-S-isoprenylcysteine methyltransferase.	Xre-family transcriptional regulator; SOS-response transcriptional repressor (RecA-mediated autopeptidase).	0.534

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