STRINGSTRING
galU galU rfbB-2 rfbB-2 ugd ugd galE-2 galE-2 ugd-2 ugd-2 manA manA manC manC manB-2 manB-2 gmd gmd scrK scrK manA-2 manA-2 BAI97967.1 BAI97967.1 manC-2 manC-2 BAI98303.1 BAI98303.1 manB-3 manB-3 rfbD rfbD glf glf
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
galUUTP-glucose-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase. (299 aa)
rfbB-2dTDP-glucose 4,6-dehydratase; Nucleoside-diphosphate-sugar epimerase. (353 aa)
ugdUDP-glucose 6-dehydrogenase. (447 aa)
galE-2UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (334 aa)
ugd-2UDP-glucose 6-dehydrogenase. (439 aa)
manAMannose-6-phosphate isomerase. (287 aa)
manCMannose-1-phosphate guanylyltransferase. (319 aa)
manB-2Phosphomannomutase. (497 aa)
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (340 aa)
scrKFructokinase; Transcriptional regulator / sugar kinase. (301 aa)
manA-2Mannose-6-phosphate isomerase. (272 aa)
BAI97967.1Putative NAD-dependent epimerase/dehydratase; Nucleoside-diphosphate-sugar epimerase. (331 aa)
manC-2Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family. (483 aa)
BAI98303.1Putative NAD-dependent epimerase/dehydratase; Nucleoside-diphosphate-sugar epimerase / UDP-glucose 4-epimerase. (295 aa)
manB-3Phosphomannomutase. (469 aa)
rfbDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (744 aa)
glfUDP-galactopyranose mutase. (748 aa)
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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