Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAI96505.1 | BAI96506.1 | SJA_C1-16710 | SJA_C1-16720 | NtrC family / response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | 0.994 |
| BAI96505.1 | BAI96509.1 | SJA_C1-16710 | SJA_C1-16750 | NtrC family / response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.744 |
| BAI96505.1 | glnG | SJA_C1-16710 | SJA_C1-16730 | NtrC family / response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Two-component system response regulator GnG/NtrC; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | 0.699 |
| BAI96505.1 | glnL | SJA_C1-16710 | SJA_C1-16740 | NtrC family / response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Two-component system histidine kinase GlnL/NtrB; NtrC family, nitrogen regulation sensor histidine kinase GlnL. | 0.906 |
| BAI96506.1 | BAI96505.1 | SJA_C1-16720 | SJA_C1-16710 | Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | NtrC family / response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.994 |
| BAI96506.1 | BAI96509.1 | SJA_C1-16720 | SJA_C1-16750 | Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.739 |
| BAI96506.1 | glnG | SJA_C1-16720 | SJA_C1-16730 | Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | Two-component system response regulator GnG/NtrC; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | 0.758 |
| BAI96506.1 | glnL | SJA_C1-16720 | SJA_C1-16740 | Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | Two-component system histidine kinase GlnL/NtrB; NtrC family, nitrogen regulation sensor histidine kinase GlnL. | 0.774 |
| BAI96509.1 | BAI96505.1 | SJA_C1-16750 | SJA_C1-16710 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | NtrC family / response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.744 |
| BAI96509.1 | BAI96506.1 | SJA_C1-16750 | SJA_C1-16720 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | 0.739 |
| BAI96509.1 | glnG | SJA_C1-16750 | SJA_C1-16730 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Two-component system response regulator GnG/NtrC; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | 0.875 |
| BAI96509.1 | glnL | SJA_C1-16750 | SJA_C1-16740 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Two-component system histidine kinase GlnL/NtrB; NtrC family, nitrogen regulation sensor histidine kinase GlnL. | 0.898 |
| glnG | BAI96505.1 | SJA_C1-16730 | SJA_C1-16710 | Two-component system response regulator GnG/NtrC; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | NtrC family / response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.699 |
| glnG | BAI96506.1 | SJA_C1-16730 | SJA_C1-16720 | Two-component system response regulator GnG/NtrC; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | 0.758 |
| glnG | BAI96509.1 | SJA_C1-16730 | SJA_C1-16750 | Two-component system response regulator GnG/NtrC; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.875 |
| glnG | glnL | SJA_C1-16730 | SJA_C1-16740 | Two-component system response regulator GnG/NtrC; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | Two-component system histidine kinase GlnL/NtrB; NtrC family, nitrogen regulation sensor histidine kinase GlnL. | 0.998 |
| glnL | BAI96505.1 | SJA_C1-16740 | SJA_C1-16710 | Two-component system histidine kinase GlnL/NtrB; NtrC family, nitrogen regulation sensor histidine kinase GlnL. | NtrC family / response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.906 |
| glnL | BAI96506.1 | SJA_C1-16740 | SJA_C1-16720 | Two-component system histidine kinase GlnL/NtrB; NtrC family, nitrogen regulation sensor histidine kinase GlnL. | Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | 0.774 |
| glnL | BAI96509.1 | SJA_C1-16740 | SJA_C1-16750 | Two-component system histidine kinase GlnL/NtrB; NtrC family, nitrogen regulation sensor histidine kinase GlnL. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.898 |
| glnL | glnG | SJA_C1-16740 | SJA_C1-16730 | Two-component system histidine kinase GlnL/NtrB; NtrC family, nitrogen regulation sensor histidine kinase GlnL. | Two-component system response regulator GnG/NtrC; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | 0.998 |