STRINGSTRING
BAI96823.1 BAI96823.1 virB10-2 virB10-2 virB9-2 virB9-2 trbF trbF trbL trbL trbK trbK trbJ trbJ virB4-2 virB4-2 trbD trbD virB2-2 virB2-2 trbB trbB BAI97795.1 BAI97795.1 trbI trbI trbG trbG trbF-2 trbF-2 trbL-2 trbL-2 trbJ-2 trbJ-2 trbE trbE trbD-2 trbD-2 trbC trbC trbB-2 trbB-2 BAI97805.1 BAI97805.1 traG traG traI traI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BAI96823.1Conserved hypothetical protein. (79 aa)
virB10-2Type IV secretory pathway VirB10 component; Pore. (422 aa)
virB9-2Type IV secretory pathway VirB9 component; Secretion pore. (355 aa)
trbFType IV secretory pathway TrbF component; Pore. (227 aa)
trbLType IV secretory pathway TrbL component; Pore. (454 aa)
trbKEntry exclusion protein TrbK. (130 aa)
trbJConjugal transfer protein TrbJ; Pore / putative mating pair formation protein / entry exclusion protein. (258 aa)
virB4-2Type IV secretory pathway VirB4 component; Secretion. (812 aa)
trbDType IV secretory pathway TrbD component; Pore. (93 aa)
virB2-2Type IV secretory pathway VirB2 component; Pilin. (113 aa)
trbBConjugal transfer protein TrbB; Secretion / Flp pilus assembly protein, ATPase CpaF. (314 aa)
BAI97795.1Conserved hypothetical protein. (75 aa)
trbIConjugal transfer protein TrbI; Type IV secretory pathway, VirB10 component. (420 aa)
trbGConjugal transfer protein TrbG; Type IV secretory pathway, VirB9 component. (285 aa)
trbF-2Conjugal transfer protein TrbF; Type IV secretory pathway, TrbF component (VirB8). (258 aa)
trbL-2Conjugal transfer protein TrbL; Type IV secretory pathway, TrbL component (VirB6). (431 aa)
trbJ-2Conjugal transfer protein TrbJ; Entry exclusion protein / type IV secretory pathway, VirB5 component. (249 aa)
trbEConjugal transfer protein TrbE; Type IV secretory pathway, VirB4 component. (816 aa)
trbD-2Conjugal transfer protein TrbD; Type IV secretory pathway, TrbD component (VirB3). (86 aa)
trbCConjugal transfer protein TrbC; Type IV secretory pathway, VirB2 component (pilin). (95 aa)
trbB-2Conjugal transfer protein TrbB; Type IV secretory pathway, VirB11 component / Flp pilus assembly protein, ATPase CpaF. (340 aa)
BAI97805.1Hypothetical protein. (138 aa)
traGConjugal transfer protein TraG; Type IV secretory pathway, VirD4 component. (673 aa)
traIConjugal transfer protein TraI; Type IV secretory pathway, VirD2 component (relaxase). (670 aa)
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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