STRINGSTRING
rfbB-2 rfbB-2 ugd ugd ugd-2 ugd-2 glmU glmU BAI97560.1 BAI97560.1 gmd gmd BAI97863.1 BAI97863.1 BAI97967.1 BAI97967.1 BAI98567.1 BAI98567.1 BAI98908.1 BAI98908.1 BAI98909.1 BAI98909.1 galU galU BAI95548.1 BAI95548.1 murA murA galE galE rfbB rfbB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rfbB-2dTDP-glucose 4,6-dehydratase; Nucleoside-diphosphate-sugar epimerase. (353 aa)
ugdUDP-glucose 6-dehydrogenase. (447 aa)
ugd-2UDP-glucose 6-dehydrogenase. (439 aa)
glmUUDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (484 aa)
BAI97560.1Putative nucleoside-diphosphate-sugar epimerase. (309 aa)
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (340 aa)
BAI97863.1Putative NAD-dependent epimerase/dehydratase; GDP-6-deoxy-D-lyxo-4-hexulose reductase Gmd (EC 4.2.1.47). (299 aa)
BAI97967.1Putative NAD-dependent epimerase/dehydratase; Nucleoside-diphosphate-sugar epimerase. (331 aa)
BAI98567.1Oxidoreductase-like protein; NAD-dependent epimerase/dehydratase / 3-beta hydroxysteroid dehydrogenase/isomerase / nucleoside-diphosphate-sugar epimerase. (331 aa)
BAI98908.1Putative cellulose synthase; UDP-forming / glycosyltransferase, probably involved in cell wall biogenesis. (1441 aa)
BAI98909.1Cellulose synthase protein C precursor; FOG: TPR repeat. (1125 aa)
galUUTP-glucose-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase. (299 aa)
BAI95548.1Glycosyltransferase, probably involved in cell wall biogenesis. (648 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (427 aa)
galEUDP-glucose 4-epimerase; Nucleoside-diphosphate-sugar epimerase. (375 aa)
rfbBdTDP-glucose 4,6-dehydratase; Nucleoside-diphosphate-sugar epimerase. (357 aa)
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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