STRINGSTRING
BAI96477.1 BAI96477.1 fixI fixI cpaE-3 cpaE-3 BAI98378.1 BAI98378.1 clpB clpB BAI98227.1 BAI98227.1 BAI98211.1 BAI98211.1 uvrB uvrB fliI fliI htpG htpG BAI97472.1 BAI97472.1 ftsH ftsH cpaE-2 cpaE-2 BAI97269.1 BAI97269.1 BAI97202.1 BAI97202.1 cpaE cpaE lon lon uvrD uvrD clpX clpX BAI96659.1 BAI96659.1 mutL mutL ychF ychF hslU hslU dnaB dnaB ycaJ ycaJ BAI96265.1 BAI96265.1 clpA clpA uvrA uvrA mrp mrp copA-4 copA-4 BAI95544.1 BAI95544.1 copA-3 copA-3 copA copA BAI95243.1 BAI95243.1 BAI95240.1 BAI95240.1 cobS cobS ruvB ruvB ruvA ruvA smc smc
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BAI96477.1ATPase component of ABC transporter with duplicated ATPase domain. (561 aa)
fixINitrogen fixation protein FixI; Cation transport ATPase. (710 aa)
cpaE-3Flp pilus assembly protein, ATPase CpaE. (383 aa)
BAI98378.1Large exoprotein involved in heme utilization or adhesion. (313 aa)
clpBATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (861 aa)
BAI98227.1Putative metal-sulfur cluster biosynthetic enzyme. (154 aa)
BAI98211.1ATPase of the AAA+ class. (751 aa)
uvrBExcinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (727 aa)
fliIFlagellum-specific ATP synthase FliI; Flagellar biosynthesis/type III secretory pathway ATPase. (442 aa)
htpGMolecular chaperone HtpG; Molecular chaperone. Has ATPase activity. (626 aa)
BAI97472.1Hypothetical protein; Superfamily I DNA and RNA helicase. (404 aa)
ftsHCell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (649 aa)
cpaE-2Flp pilus assembly protein ATPase CpaE. (428 aa)
BAI97269.1Putative ATPase. (370 aa)
BAI97202.1Conserved hypothetical protein; Kinesin-like protein. (893 aa)
cpaEFlp pilus assembly protein ATPase CpaE. (411 aa)
lonATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (798 aa)
uvrDATP-dependent DNA helicase PcrA/superfamily I DNA and RNA helicase. (758 aa)
clpXATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (422 aa)
BAI96659.1Hypothetical protein. (553 aa)
mutLDNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (590 aa)
ychFPutative GTPase; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (366 aa)
hslUATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. (435 aa)
dnaBReplicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (493 aa)
ycaJATPase related to the helicase subunit of the Holliday junction resolvase. (436 aa)
BAI96265.1MoxR-like ATPase / ATPase AAA_5. (281 aa)
clpAATP-dependent Clp protease ATP-binding subunit ClpA; ATPase with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family. (773 aa)
uvrAExcinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (985 aa)
mrpATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (321 aa)
copA-4Cation transport ATPase; Cu2+-exporting ATPase. (779 aa)
BAI95544.1ATPase E1-E2 type / cation transport ATPase; bifunctional protein. (844 aa)
copA-3Cation transport ATPase; Cu2+-exporting ATPase. (833 aa)
copACation transport ATPase; Cu2+-exporting ATPase. (785 aa)
BAI95243.1ATPase of the AAA+ class. (336 aa)
BAI95240.1Superfamily I DNA and RNA helicase. (605 aa)
cobSMoxR-like ATPase. (335 aa)
ruvBHolliday junction resolvasome helicase subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (339 aa)
ruvAHolliday junction resolvasome DNA-binding subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (202 aa)
smcChromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1147 aa)
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
Server load: low (10%) [HD]