node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAI95240.1 | recQ | SJA_C1-04060 | SJA_C1-01670 | Superfamily I DNA and RNA helicase. | Superfamily II DNA helicase. | 0.750 |
BAI95240.1 | topA | SJA_C1-04060 | SJA_C1-17160 | Superfamily I DNA and RNA helicase. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.647 |
BAI95240.1 | uvrD | SJA_C1-04060 | SJA_C1-21470 | Superfamily I DNA and RNA helicase. | ATP-dependent DNA helicase PcrA/superfamily I DNA and RNA helicase. | 0.923 |
BAI95577.1 | gyrB | SJA_C1-07430 | SJA_C1-00470 | Putative DNA topoisomerase IB. | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.827 |
BAI95577.1 | gyrB-2 | SJA_C1-07430 | SJA_C1-22260 | Putative DNA topoisomerase IB. | DNA gyrase subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. | 0.827 |
BAI95577.1 | recQ | SJA_C1-07430 | SJA_C1-01670 | Putative DNA topoisomerase IB. | Superfamily II DNA helicase. | 0.850 |
BAI95577.1 | topA | SJA_C1-07430 | SJA_C1-17160 | Putative DNA topoisomerase IB. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.495 |
BAI96484.1 | BAI98839.1 | SJA_C1-16500 | SJA_C2-04760 | Putative UvrD/Rep helicase; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | Type IV secretory pathway VirD2 component; Relaxase; remnant. | 0.815 |
BAI96484.1 | priA | SJA_C1-16500 | SJA_C1-26780 | Putative UvrD/Rep helicase; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.469 |
BAI96484.1 | recG | SJA_C1-16500 | SJA_C1-14210 | Putative UvrD/Rep helicase; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase RecG. | 0.422 |
BAI96484.1 | ruvA | SJA_C1-16500 | SJA_C1-00990 | Putative UvrD/Rep helicase; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | Holliday junction resolvasome DNA-binding subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.459 |
BAI96484.1 | virD2-2 | SJA_C1-16500 | SJA_C1-04420 | Putative UvrD/Rep helicase; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | Type IV secretory pathway VirD2 component; Relaxase. | 0.815 |
BAI97472.1 | recQ | SJA_C1-26380 | SJA_C1-01670 | Hypothetical protein; Superfamily I DNA and RNA helicase. | Superfamily II DNA helicase. | 0.736 |
BAI97472.1 | topA | SJA_C1-26380 | SJA_C1-17160 | Hypothetical protein; Superfamily I DNA and RNA helicase. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.574 |
BAI98839.1 | BAI96484.1 | SJA_C2-04760 | SJA_C1-16500 | Type IV secretory pathway VirD2 component; Relaxase; remnant. | Putative UvrD/Rep helicase; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | 0.815 |
dnaB | gyrA | SJA_C1-15800 | SJA_C1-21310 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.445 |
dnaB | priA | SJA_C1-15800 | SJA_C1-26780 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.558 |
dnaB | topA | SJA_C1-15800 | SJA_C1-17160 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.592 |
dnaB | uvrD | SJA_C1-15800 | SJA_C1-21470 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | ATP-dependent DNA helicase PcrA/superfamily I DNA and RNA helicase. | 0.713 |
gyrA | dnaB | SJA_C1-21310 | SJA_C1-15800 | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.445 |