STRINGSTRING
cysG cysG cobF cobF cobM cobM rsmI rsmI cobI cobI cysG1 cysG1 cobJ cobJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cysGuroporphyrin-III C-methyltransferase; uroporphyrinogen-III methylase / siroheme synthase. (262 aa)
cobFprecorrin-6A synthase deacetylating; Catalyzes the methylation of C-1 in precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A. (248 aa)
cobMPrecorrin-4 methyltransferase; Belongs to the precorrin methyltransferase family. (260 aa)
rsmIPutative methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (285 aa)
cobIPrecorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family. (239 aa)
cysG1uroporphyrin-III C-methyltransferase; uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family. (260 aa)
cobJprecorrin-3B C17-methyltransferase. (249 aa)
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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