STRINGSTRING
tadC-2 tadC-2 tadB-2 tadB-2 pulF pulF tadC tadC tadB tadB tadB-3 tadB-3 tadC-3 tadC-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tadC-2Flp pilus assembly protein TadC. (330 aa)
tadB-2Flp pilus assembly protein TadB. (332 aa)
pulFType II secretory pathway component PulF; General secretion pathway protein F. (405 aa)
tadCFlp pilus assembly protein TadC. (322 aa)
tadBFlp pilus assembly protein TadB. (333 aa)
tadB-3Flp pilus assembly protein TadB; Type II secretion system protein. (297 aa)
tadC-3Flp pilus assembly protein TadC; Type II secretion system protein. (287 aa)
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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