STRINGSTRING
BAI94965.1 BAI94965.1 BAI95062.1 BAI95062.1 secD secD secF secF secY secY BAI95572.1 BAI95572.1 BAI95609.1 BAI95609.1 msrA msrA sodC sodC msrA-2 msrA-2 pdhC pdhC BAI96214.1 BAI96214.1 BAI96226.1 BAI96226.1 pdhB pdhB BAI96365.1 BAI96365.1 secG secG trxA trxA secA secA BAI96699.1 BAI96699.1 ahpD ahpD BAI96816.1 BAI96816.1 BAI96817.1 BAI96817.1 ahpC-2 ahpC-2 pdhC-2 pdhC-2 trxB trxB bfr bfr sucB sucB BAI97336.1 BAI97336.1 bcp bcp secE secE ahpC-3 ahpC-3 sodA sodA BAI97669.1 BAI97669.1 ybbN ybbN BAI98063.1 BAI98063.1 BAI98512.1 BAI98512.1 BAI98513.1 BAI98513.1 trxB-2 trxB-2 adh-5 adh-5 BAI98837.1 BAI98837.1 BAI98859.1 BAI98859.1 adh-6 adh-6 katG katG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BAI94965.1Putative monooxygenase; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase or related flavin-dependent oxidoreductase. (455 aa)
BAI95062.1Conserved hypothetical protein. (197 aa)
secDPreprotein translocase SecD subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (533 aa)
secFPreprotein translocase SecF subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (328 aa)
secYPreprotein translocase SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (454 aa)
BAI95572.1ATP-binding cassette protein; Subfamily B, bacterial / ABC-type multidrug transport system, ATPase and permease component / ABC-type multidrug/protein/lipid transport system, ATPase component. (595 aa)
BAI95609.1Peroxiredoxin. (178 aa)
msrAPeptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (223 aa)
sodCCu/Zn superoxide dismutase. (183 aa)
msrA-2Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (185 aa)
pdhCPyruvate dehydrogenase E2 component; Dihydrolipoamide acetyltransferase. (415 aa)
BAI96214.1Putative acyltransferase; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, or related enzyme; remnant. (95 aa)
BAI96226.1Zn-dependent alcohol dehydrogenase; Class III. (363 aa)
pdhBPyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (456 aa)
BAI96365.1Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (151 aa)
secGPreprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (125 aa)
trxAThioredoxin 1; Thiol-disulfide isomerase or thioredoxin; Belongs to the thioredoxin family. (106 aa)
secAPreprotein translocase SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (909 aa)
BAI96699.1Putative acyltransferase; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, or related enzyme; remnant. (79 aa)
ahpDAlkylhydroperoxidase AhpD core; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (181 aa)
BAI96816.1peroxiredoxin/AhpC/Tsa family protein; Remnant; selenocysteine-containing. (156 aa)
BAI96817.1peroxiredoxin/AhpC/Tsa family protein; Remnant; selenocysteine-containing. (76 aa)
ahpC-2peroxiredoxin/AhpC/Tsa family protein; Selenocysteine-containing. (220 aa)
pdhC-2Pyruvate dehydrogenase E2 component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (427 aa)
trxBNADPH-dependent thioredoxin reductase. (320 aa)
bfrBacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (159 aa)
sucB2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (412 aa)
BAI97336.1Alkanal monooxygenase alpha chain (bacterial luciferase alpha chain) / coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase or related flavin-dependent oxidoreductase. (349 aa)
bcpBacterioferritin comigratory protein; Peroxiredoxin / alkyl hydroperoxide reductase / thiol specific antioxidant / Mal allergen. (153 aa)
secEPreprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (71 aa)
ahpC-3Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (187 aa)
sodASuperoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (204 aa)
BAI97669.1Peptide/nickel transport system substrate-binding protein / ABC-type oligopeptide transport system, periplasmic component. (512 aa)
ybbNThioredoxin domain-containing protein. (303 aa)
BAI98063.1Truncated hemoglobin. (130 aa)
BAI98512.1Peroxiredoxin. (224 aa)
BAI98513.1Monooxygenase, NtaA / SnaA/SoxAfamily / coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase or related flavin-dependent oxidoreductase. (445 aa)
trxB-2Thioredoxin reductase (NADPH). (304 aa)
adh-5Zn-dependent alcohol dehydrogenase; Class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (370 aa)
BAI98837.1Hypothetical protein. (183 aa)
BAI98859.1Putative aryl-alcohol dehydrogenase; Zn-dependent alcohol dehydrogenase, class III. (366 aa)
adh-6Zn-dependent alcohol dehydrogenase, class III. (377 aa)
katGCatalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (740 aa)
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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