STRINGSTRING
pbp-2 pbp-2 pbp pbp mrcA mrcA mrdA mrdA ftsI ftsI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pbp-2Membrane carboxypeptidase (penicillin-binding protein). (689 aa)
pbpMembrane carboxypeptidase (penicillin-binding protein). (689 aa)
mrcAPenicillin binding protein 1A; Bifunctional protein; peptidoglycan glycosyltransferase / membrane carboxypeptidase. (845 aa)
mrdAPenicillin binding protein 2; Cell division protein FtsI / peptidoglycan glycosyltransferase. (689 aa)
ftsICell division protein FtsI; Penicillin binding protein 3. (566 aa)
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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