Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| linB | linF | SJA_C1-19590 | SJA_C2-04820 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase LinB; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity since not only monochloroalkanes (C3 to C10) but also dichloroalkanes (> C3), bromoalkanes, and chlorinated aliphatic alcohols are good substrates. Shows almost no activity with 1,2-dichloroethane, but very high activity with the brominated analog. Is involved in the degradation of the important environmental pollutant gam [...] | Maleylacetate reductase LinF; Catalyzes the NADH-dependent reduction of maleylacetate to beta-ketoadipate, a step in the degradation of gamma- hexachlorocyclohexane (gamma-HCH or lindane). Has an essential role in this assimilation pathway that allows S.japonicum UT26 to grow on gamma-HCH as the sole source of carbon and energy. | 0.706 |
| linB | linH | SJA_C1-19590 | SJA_C2-05220 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase LinB; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity since not only monochloroalkanes (C3 to C10) but also dichloroalkanes (> C3), bromoalkanes, and chlorinated aliphatic alcohols are good substrates. Shows almost no activity with 1,2-dichloroethane, but very high activity with the brominated analog. Is involved in the degradation of the important environmental pollutant gam [...] | 3-oxoadipate CoA-succinyltransferase beta subunit LinH; Gamma-hexachlorocyclohexane degradation. | 0.547 |
| linB | linI | SJA_C1-19590 | SJA_C2-05200 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase LinB; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity since not only monochloroalkanes (C3 to C10) but also dichloroalkanes (> C3), bromoalkanes, and chlorinated aliphatic alcohols are good substrates. Shows almost no activity with 1,2-dichloroethane, but very high activity with the brominated analog. Is involved in the degradation of the important environmental pollutant gam [...] | IclR-family transcriptional regulator LinI; Gamma-hexachlorocyclohexane degradation. | 0.442 |
| linB | linJ | SJA_C1-19590 | SJA_C2-05190 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase LinB; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity since not only monochloroalkanes (C3 to C10) but also dichloroalkanes (> C3), bromoalkanes, and chlorinated aliphatic alcohols are good substrates. Shows almost no activity with 1,2-dichloroethane, but very high activity with the brominated analog. Is involved in the degradation of the important environmental pollutant gam [...] | acetyl-CoA C-acetyltransferase LinJ; Gamma-hexachlorocyclohexane degradation; Belongs to the thiolase-like superfamily. Thiolase family. | 0.694 |
| linB | linK | SJA_C1-19590 | SJA_C1-00210 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase LinB; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity since not only monochloroalkanes (C3 to C10) but also dichloroalkanes (> C3), bromoalkanes, and chlorinated aliphatic alcohols are good substrates. Shows almost no activity with 1,2-dichloroethane, but very high activity with the brominated analog. Is involved in the degradation of the important environmental pollutant gam [...] | ABC-type transport system involved in resistance to organic solvents, permease component / gamma-hexachlorocyclohexane degradation. | 0.438 |
| linB | linL | SJA_C1-19590 | SJA_C1-00220 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase LinB; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity since not only monochloroalkanes (C3 to C10) but also dichloroalkanes (> C3), bromoalkanes, and chlorinated aliphatic alcohols are good substrates. Shows almost no activity with 1,2-dichloroethane, but very high activity with the brominated analog. Is involved in the degradation of the important environmental pollutant gam [...] | ABC-type transport system involved in resistance to organic solvents, ATPase component / gamma-hexachlorocyclohexane degradation. | 0.438 |
| linB | linM | SJA_C1-19590 | SJA_C1-00230 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase LinB; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity since not only monochloroalkanes (C3 to C10) but also dichloroalkanes (> C3), bromoalkanes, and chlorinated aliphatic alcohols are good substrates. Shows almost no activity with 1,2-dichloroethane, but very high activity with the brominated analog. Is involved in the degradation of the important environmental pollutant gam [...] | ABC-type transport system involved in resistance to organic solvents, periplasmic component / gamma-hexachlorocyclohexane degradation. | 0.435 |
| linF | linB | SJA_C2-04820 | SJA_C1-19590 | Maleylacetate reductase LinF; Catalyzes the NADH-dependent reduction of maleylacetate to beta-ketoadipate, a step in the degradation of gamma- hexachlorocyclohexane (gamma-HCH or lindane). Has an essential role in this assimilation pathway that allows S.japonicum UT26 to grow on gamma-HCH as the sole source of carbon and energy. | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase LinB; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity since not only monochloroalkanes (C3 to C10) but also dichloroalkanes (> C3), bromoalkanes, and chlorinated aliphatic alcohols are good substrates. Shows almost no activity with 1,2-dichloroethane, but very high activity with the brominated analog. Is involved in the degradation of the important environmental pollutant gam [...] | 0.706 |
| linF | linH | SJA_C2-04820 | SJA_C2-05220 | Maleylacetate reductase LinF; Catalyzes the NADH-dependent reduction of maleylacetate to beta-ketoadipate, a step in the degradation of gamma- hexachlorocyclohexane (gamma-HCH or lindane). Has an essential role in this assimilation pathway that allows S.japonicum UT26 to grow on gamma-HCH as the sole source of carbon and energy. | 3-oxoadipate CoA-succinyltransferase beta subunit LinH; Gamma-hexachlorocyclohexane degradation. | 0.619 |
| linF | linI | SJA_C2-04820 | SJA_C2-05200 | Maleylacetate reductase LinF; Catalyzes the NADH-dependent reduction of maleylacetate to beta-ketoadipate, a step in the degradation of gamma- hexachlorocyclohexane (gamma-HCH or lindane). Has an essential role in this assimilation pathway that allows S.japonicum UT26 to grow on gamma-HCH as the sole source of carbon and energy. | IclR-family transcriptional regulator LinI; Gamma-hexachlorocyclohexane degradation. | 0.523 |
| linF | linJ | SJA_C2-04820 | SJA_C2-05190 | Maleylacetate reductase LinF; Catalyzes the NADH-dependent reduction of maleylacetate to beta-ketoadipate, a step in the degradation of gamma- hexachlorocyclohexane (gamma-HCH or lindane). Has an essential role in this assimilation pathway that allows S.japonicum UT26 to grow on gamma-HCH as the sole source of carbon and energy. | acetyl-CoA C-acetyltransferase LinJ; Gamma-hexachlorocyclohexane degradation; Belongs to the thiolase-like superfamily. Thiolase family. | 0.604 |
| linF | linK | SJA_C2-04820 | SJA_C1-00210 | Maleylacetate reductase LinF; Catalyzes the NADH-dependent reduction of maleylacetate to beta-ketoadipate, a step in the degradation of gamma- hexachlorocyclohexane (gamma-HCH or lindane). Has an essential role in this assimilation pathway that allows S.japonicum UT26 to grow on gamma-HCH as the sole source of carbon and energy. | ABC-type transport system involved in resistance to organic solvents, permease component / gamma-hexachlorocyclohexane degradation. | 0.428 |
| linF | linL | SJA_C2-04820 | SJA_C1-00220 | Maleylacetate reductase LinF; Catalyzes the NADH-dependent reduction of maleylacetate to beta-ketoadipate, a step in the degradation of gamma- hexachlorocyclohexane (gamma-HCH or lindane). Has an essential role in this assimilation pathway that allows S.japonicum UT26 to grow on gamma-HCH as the sole source of carbon and energy. | ABC-type transport system involved in resistance to organic solvents, ATPase component / gamma-hexachlorocyclohexane degradation. | 0.428 |
| linF | linM | SJA_C2-04820 | SJA_C1-00230 | Maleylacetate reductase LinF; Catalyzes the NADH-dependent reduction of maleylacetate to beta-ketoadipate, a step in the degradation of gamma- hexachlorocyclohexane (gamma-HCH or lindane). Has an essential role in this assimilation pathway that allows S.japonicum UT26 to grow on gamma-HCH as the sole source of carbon and energy. | ABC-type transport system involved in resistance to organic solvents, periplasmic component / gamma-hexachlorocyclohexane degradation. | 0.428 |
| linH | linB | SJA_C2-05220 | SJA_C1-19590 | 3-oxoadipate CoA-succinyltransferase beta subunit LinH; Gamma-hexachlorocyclohexane degradation. | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase LinB; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity since not only monochloroalkanes (C3 to C10) but also dichloroalkanes (> C3), bromoalkanes, and chlorinated aliphatic alcohols are good substrates. Shows almost no activity with 1,2-dichloroethane, but very high activity with the brominated analog. Is involved in the degradation of the important environmental pollutant gam [...] | 0.547 |
| linH | linF | SJA_C2-05220 | SJA_C2-04820 | 3-oxoadipate CoA-succinyltransferase beta subunit LinH; Gamma-hexachlorocyclohexane degradation. | Maleylacetate reductase LinF; Catalyzes the NADH-dependent reduction of maleylacetate to beta-ketoadipate, a step in the degradation of gamma- hexachlorocyclohexane (gamma-HCH or lindane). Has an essential role in this assimilation pathway that allows S.japonicum UT26 to grow on gamma-HCH as the sole source of carbon and energy. | 0.619 |
| linH | linI | SJA_C2-05220 | SJA_C2-05200 | 3-oxoadipate CoA-succinyltransferase beta subunit LinH; Gamma-hexachlorocyclohexane degradation. | IclR-family transcriptional regulator LinI; Gamma-hexachlorocyclohexane degradation. | 0.745 |
| linH | linJ | SJA_C2-05220 | SJA_C2-05190 | 3-oxoadipate CoA-succinyltransferase beta subunit LinH; Gamma-hexachlorocyclohexane degradation. | acetyl-CoA C-acetyltransferase LinJ; Gamma-hexachlorocyclohexane degradation; Belongs to the thiolase-like superfamily. Thiolase family. | 0.919 |
| linH | linK | SJA_C2-05220 | SJA_C1-00210 | 3-oxoadipate CoA-succinyltransferase beta subunit LinH; Gamma-hexachlorocyclohexane degradation. | ABC-type transport system involved in resistance to organic solvents, permease component / gamma-hexachlorocyclohexane degradation. | 0.430 |
| linH | linL | SJA_C2-05220 | SJA_C1-00220 | 3-oxoadipate CoA-succinyltransferase beta subunit LinH; Gamma-hexachlorocyclohexane degradation. | ABC-type transport system involved in resistance to organic solvents, ATPase component / gamma-hexachlorocyclohexane degradation. | 0.430 |
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