STRINGSTRING
amiA amiA BAI95659.1 BAI95659.1 BAI95734.1 BAI95734.1 BAI95857.1 BAI95857.1 BAI96608.1 BAI96608.1 acrA acrA BAI97343.1 BAI97343.1 BAI97406.1 BAI97406.1 BAI97407.1 BAI97407.1 BAI97431.1 BAI97431.1 ppiA ppiA BAI98689.1 BAI98689.1 BAI98690.1 BAI98690.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
amiAN-acetylmuramoyl-L-alanine amidase. (334 aa)
BAI95659.1Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family. (201 aa)
BAI95734.1Trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain. (275 aa)
BAI95857.1Trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. (502 aa)
BAI96608.1Cadherin EGF LAG seven-pass G-type receptor 2 (flamingo) / RTX toxin or related Ca2+-binding protein. (1431 aa)
acrAMembrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (387 aa)
BAI97343.1TolC-like protein; Type I secretion outer membrane protein, TolC / outer membrane factor, OMF family. (488 aa)
BAI97406.1RND-family efflux transporter; Hydrophobic/amphiphilic exporter-1 (mainly G-bacteria), HAE1 family / cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1034 aa)
BAI97407.1HlyD-family secretion protein; Type I secrection membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (352 aa)
BAI97431.1HlyD-family secretion protein; Type I secrection membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (332 aa)
ppiACyclophilin A / peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family. (221 aa)
BAI98689.1HlyD-family secretion protein; Type I secrection membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (376 aa)
BAI98690.1HAE1-family efflux protein; Hydrophobic/amphiphilic exporter-1 (mainly G-bacteria), HAE1 family / cation/multidrug efflux pump. (1047 aa)
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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