(12 nodes) Cytosolic small ribosomal subunit, and Ribosomal protein S6e network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0NR26	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (262 aa)
	A0A0E0NW98	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (298 aa)
	A0A0E0NZ99	Uncharacterized protein. (119 aa)
	A0A0E0P061	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (171 aa)
	A0A0E0P2K9	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (154 aa)
	A0A0E0P4G8	Uncharacterized protein. (238 aa)
	A0A0E0PT34	Ribosomal_S10 domain-containing protein. (149 aa)
	A0A0E0Q424	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (138 aa)
	A0A0E0QBF5	Uncharacterized protein. (198 aa)
	A0A0E0QVA5	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (148 aa)
	A0A0E0RD48	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (149 aa)
	rps7	30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. (156 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0E0NR26	A0A0E0NW98	A0A0E0NR26	A0A0E0NW98	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.997
A0A0E0NR26	A0A0E0NZ99	A0A0E0NR26	A0A0E0NZ99	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	Uncharacterized protein.	0.996
A0A0E0NR26	A0A0E0P061	A0A0E0NR26	A0A0E0P061	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.995
A0A0E0NR26	A0A0E0P2K9	A0A0E0NR26	A0A0E0P2K9	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.997
A0A0E0NR26	A0A0E0P4G8	A0A0E0NR26	A0A0E0P4G8	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	Uncharacterized protein.	0.996
A0A0E0NR26	A0A0E0PT34	A0A0E0NR26	A0A0E0PT34	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	Ribosomal_S10 domain-containing protein.	0.996
A0A0E0NR26	A0A0E0Q424	A0A0E0NR26	A0A0E0Q424	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.995
A0A0E0NR26	A0A0E0QBF5	A0A0E0NR26	A0A0E0QBF5	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	Uncharacterized protein.	0.997
A0A0E0NR26	A0A0E0QVA5	A0A0E0NR26	A0A0E0QVA5	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.996
A0A0E0NR26	A0A0E0RD48	A0A0E0NR26	A0A0E0RD48	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.996
A0A0E0NR26	rps7	A0A0E0NR26	H6CSP0	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.	0.997
A0A0E0NW98	A0A0E0NR26	A0A0E0NW98	A0A0E0NR26	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.997
A0A0E0NW98	A0A0E0NZ99	A0A0E0NW98	A0A0E0NZ99	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.994
A0A0E0NW98	A0A0E0P061	A0A0E0NW98	A0A0E0P061	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.991
A0A0E0NW98	A0A0E0P2K9	A0A0E0NW98	A0A0E0P2K9	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.995
A0A0E0NW98	A0A0E0P4G8	A0A0E0NW98	A0A0E0P4G8	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.994
A0A0E0NW98	A0A0E0PT34	A0A0E0NW98	A0A0E0PT34	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Ribosomal_S10 domain-containing protein.	0.995
A0A0E0NW98	A0A0E0Q424	A0A0E0NW98	A0A0E0Q424	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.995
A0A0E0NW98	A0A0E0QBF5	A0A0E0NW98	A0A0E0QBF5	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.994
A0A0E0NW98	A0A0E0QVA5	A0A0E0NW98	A0A0E0QVA5	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.995