(5 nodes) Mixed, incl. Ribosomal protein L2, and 60S acidic ribosomal protein P0 network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0NBT8	Uncharacterized protein. (493 aa)
	A0A0E0QCJ9	Uncharacterized protein. (110 aa)
	A0A0E0R4P3	Syntaxin-6_N domain-containing protein; Belongs to the universal ribosomal protein uL3 family. (666 aa)
	A0A0E0RDD2	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (319 aa)
	A0A0E0RIW5	Ribosomal_L2_C domain-containing protein. (261 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0NBT8	A0A0E0QCJ9	Uncharacterized protein.	Uncharacterized protein.	0.942
A0A0E0NBT8	A0A0E0R4P3	Uncharacterized protein.	Syntaxin-6_N domain-containing protein; Belongs to the universal ribosomal protein uL3 family.	0.999
A0A0E0NBT8	A0A0E0RDD2	Uncharacterized protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999
A0A0E0NBT8	A0A0E0RIW5	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.999
A0A0E0QCJ9	A0A0E0NBT8	Uncharacterized protein.	Uncharacterized protein.	0.942
A0A0E0QCJ9	A0A0E0R4P3	Uncharacterized protein.	Syntaxin-6_N domain-containing protein; Belongs to the universal ribosomal protein uL3 family.	0.995
A0A0E0QCJ9	A0A0E0RDD2	Uncharacterized protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.991
A0A0E0QCJ9	A0A0E0RIW5	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.996
A0A0E0R4P3	A0A0E0NBT8	Syntaxin-6_N domain-containing protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein.	0.999
A0A0E0R4P3	A0A0E0QCJ9	Syntaxin-6_N domain-containing protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein.	0.995
A0A0E0R4P3	A0A0E0RDD2	Syntaxin-6_N domain-containing protein; Belongs to the universal ribosomal protein uL3 family.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.998
A0A0E0R4P3	A0A0E0RIW5	Syntaxin-6_N domain-containing protein; Belongs to the universal ribosomal protein uL3 family.	Ribosomal_L2_C domain-containing protein.	0.999
A0A0E0RDD2	A0A0E0NBT8	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.999
A0A0E0RDD2	A0A0E0QCJ9	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.991
A0A0E0RDD2	A0A0E0R4P3	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Syntaxin-6_N domain-containing protein; Belongs to the universal ribosomal protein uL3 family.	0.998
A0A0E0RDD2	A0A0E0RIW5	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal_L2_C domain-containing protein.	0.997
A0A0E0RIW5	A0A0E0NBT8	Ribosomal_L2_C domain-containing protein.	Uncharacterized protein.	0.999
A0A0E0RIW5	A0A0E0QCJ9	Ribosomal_L2_C domain-containing protein.	Uncharacterized protein.	0.996
A0A0E0RIW5	A0A0E0R4P3	Ribosomal_L2_C domain-containing protein.	Syntaxin-6_N domain-containing protein; Belongs to the universal ribosomal protein uL3 family.	0.999
A0A0E0RIW5	A0A0E0RDD2	Ribosomal_L2_C domain-containing protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.997