STRINGSTRING
A0A0E0MSV1 A0A0E0MSV1 A0A0E0MSV2 A0A0E0MSV2 A0A0E0MSV4 A0A0E0MSV4 A0A0E0MUA0 A0A0E0MUA0 A0A0E0MVJ8 A0A0E0MVJ8 A0A0E0N5R0 A0A0E0N5R0 A0A0E0N830 A0A0E0N830 A0A0E0N8H5 A0A0E0N8H5 A0A0E0N8N2 A0A0E0N8N2 A0A0E0N972 A0A0E0N972 A0A0E0N9I8 A0A0E0N9I8 A0A0E0N9S8 A0A0E0N9S8 A0A0E0N9T9 A0A0E0N9T9 A0A0E0NAM8 A0A0E0NAM8 A0A0E0NC68 A0A0E0NC68 A0A0E0NCB9 A0A0E0NCB9 A0A0E0NCR4 A0A0E0NCR4 A0A0E0ND29 A0A0E0ND29 A0A0E0NDC6 A0A0E0NDC6 A0A0E0NDD6 A0A0E0NDD6 A0A0E0NEH8 A0A0E0NEH8 A0A0E0NEW3 A0A0E0NEW3 A0A0E0NFD7 A0A0E0NFD7 A0A0E0NH22 A0A0E0NH22 A0A0E0NHU1 A0A0E0NHU1 A0A0E0NKH3 A0A0E0NKH3 A0A0E0NN68 A0A0E0NN68 A0A0E0NRI1 A0A0E0NRI1 A0A0E0NRK0 A0A0E0NRK0 A0A0E0NRN0 A0A0E0NRN0 A0A0E0NS86 A0A0E0NS86 A0A0E0NS92 A0A0E0NS92 A0A0E0NST8 A0A0E0NST8 A0A0E0NTV4 A0A0E0NTV4 A0A0E0NTY6 A0A0E0NTY6 A0A0E0NU28 A0A0E0NU28 A0A0E0NUH1 A0A0E0NUH1 A0A0E0NV53 A0A0E0NV53 A0A0E0NWF7 A0A0E0NWF7 A0A0E0P099 A0A0E0P099 A0A0E0P0B1 A0A0E0P0B1 A0A0E0P0H8 A0A0E0P0H8 A0A0E0P155 A0A0E0P155 A0A0E0P2Y7 A0A0E0P2Y7 A0A0E0P2Y8 A0A0E0P2Y8 A0A0E0P3H5 A0A0E0P3H5 A0A0E0P3Z8 A0A0E0P3Z8 A0A0E0PAC9 A0A0E0PAC9 A0A0E0PCG3 A0A0E0PCG3 A0A0E0PHY9 A0A0E0PHY9 A0A0E0PKL0 A0A0E0PKL0 A0A0E0PLI0 A0A0E0PLI0 A0A0E0PU02 A0A0E0PU02 A0A0E0PV17 A0A0E0PV17 A0A0E0PX05 A0A0E0PX05 A0A0E0PXC4 A0A0E0PXC4 A0A0E0PXC5 A0A0E0PXC5 A0A0E0PZZ8 A0A0E0PZZ8 A0A0E0Q0Z7 A0A0E0Q0Z7 A0A0E0Q3V9 A0A0E0Q3V9 A0A0E0Q4I0 A0A0E0Q4I0 A0A0E0Q5C6 A0A0E0Q5C6 A0A0E0Q5D7 A0A0E0Q5D7 A0A0E0QB24 A0A0E0QB24 A0A0E0QEG6 A0A0E0QEG6 A0A0E0QGQ5 A0A0E0QGQ5 A0A0E0QJM9 A0A0E0QJM9 A0A0E0QL37 A0A0E0QL37 A0A0E0QMD2 A0A0E0QMD2 A0A0E0QMP1 A0A0E0QMP1 A0A0E0QNI3 A0A0E0QNI3 A0A0E0QQL3 A0A0E0QQL3 A0A0E0QQU9 A0A0E0QQU9 A0A0E0QR93 A0A0E0QR93 A0A0E0QZY6 A0A0E0QZY6 A0A0E0R0J9 A0A0E0R0J9 A0A0E0R0M1 A0A0E0R0M1 A0A0E0R0Z0 A0A0E0R0Z0 A0A0E0R441 A0A0E0R441 A0A0E0R442 A0A0E0R442 A0A0E0R776 A0A0E0R776 A0A0E0R8P4 A0A0E0R8P4 A0A0E0RBP7 A0A0E0RBP7 A0A0E0RDN8 A0A0E0RDN8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0E0MSV1Uncharacterized protein. (254 aa)
A0A0E0MSV2Uncharacterized protein. (159 aa)
A0A0E0MSV4WD_REPEATS_REGION domain-containing protein. (347 aa)
A0A0E0MUA0PRP1_N domain-containing protein. (930 aa)
A0A0E0MVJ8Uncharacterized protein. (517 aa)
A0A0E0N5R0RRM domain-containing protein. (419 aa)
A0A0E0N830Sm domain-containing protein. (443 aa)
A0A0E0N8H5Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (190 aa)
A0A0E0N8N2Uncharacterized protein. (2176 aa)
A0A0E0N972Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (141 aa)
A0A0E0N9I8CPSF_A domain-containing protein. (1234 aa)
A0A0E0N9S8TOG domain-containing protein. (1198 aa)
A0A0E0N9T9Uncharacterized protein. (797 aa)
A0A0E0NAM8Sm domain-containing protein. (67 aa)
A0A0E0NC68Uncharacterized protein. (284 aa)
A0A0E0NCB9Uncharacterized protein. (792 aa)
A0A0E0NCR4U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (230 aa)
A0A0E0ND29MFAP1 domain-containing protein. (435 aa)
A0A0E0NDC6Uncharacterized protein. (350 aa)
A0A0E0NDD6MFAP1 domain-containing protein. (361 aa)
A0A0E0NEH8SNRNP27 domain-containing protein. (199 aa)
A0A0E0NEW3SF3b1 domain-containing protein. (1186 aa)
A0A0E0NFD7Uncharacterized protein. (802 aa)
A0A0E0NH22Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (102 aa)
A0A0E0NHU1Uncharacterized protein. (1186 aa)
A0A0E0NKH3Nop domain-containing protein. (375 aa)
A0A0E0NN68PSP domain-containing protein. (582 aa)
A0A0E0NRI1Uncharacterized protein. (2032 aa)
A0A0E0NRK0Uncharacterized protein. (1169 aa)
A0A0E0NRN0Uncharacterized protein. (99 aa)
A0A0E0NS86Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (134 aa)
A0A0E0NS92Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
A0A0E0NST8Matrin-type domain-containing protein. (351 aa)
A0A0E0NTV4Uncharacterized protein. (231 aa)
A0A0E0NTY6Uncharacterized protein. (953 aa)
A0A0E0NU28Uncharacterized protein; Belongs to the DEAD box helicase family. (771 aa)
A0A0E0NUH1Uncharacterized protein. (467 aa)
A0A0E0NV53WD_REPEATS_REGION domain-containing protein. (433 aa)
A0A0E0NWF7Small nuclear ribonucleoprotein G. (80 aa)
A0A0E0P099Uncharacterized protein; Belongs to the DEAD box helicase family. (736 aa)
A0A0E0P0B1Protein kinase domain-containing protein. (1153 aa)
A0A0E0P0H8Matrin-type domain-containing protein. (507 aa)
A0A0E0P155Uncharacterized protein. (2123 aa)
A0A0E0P2Y7Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (219 aa)
A0A0E0P2Y8RRM domain-containing protein. (130 aa)
A0A0E0P3H5Uncharacterized protein. (886 aa)
A0A0E0P3Z8WD_REPEATS_REGION domain-containing protein. (561 aa)
A0A0E0PAC9Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (127 aa)
A0A0E0PCG3Nop domain-containing protein. (654 aa)
A0A0E0PHY9MPN domain-containing protein. (2349 aa)
A0A0E0PKL0Small nuclear ribonucleoprotein Sm D2. (106 aa)
A0A0E0PLI0Uncharacterized protein. (110 aa)
A0A0E0PU02MPN domain-containing protein. (2380 aa)
A0A0E0PV17Matrin-type domain-containing protein. (250 aa)
A0A0E0PX05TFIIS N-terminal domain-containing protein. (290 aa)
A0A0E0PXC4MFAP1 domain-containing protein. (137 aa)
A0A0E0PXC5MFAP1 domain-containing protein. (87 aa)
A0A0E0PZZ8Tr-type G domain-containing protein. (997 aa)
A0A0E0Q0Z7WD_REPEATS_REGION domain-containing protein. (408 aa)
A0A0E0Q3V9Nop domain-containing protein. (565 aa)
A0A0E0Q4I0Small nuclear ribonucleoprotein-associated protein. (261 aa)
A0A0E0Q5C6Uncharacterized protein. (144 aa)
A0A0E0Q5D7CPSF_A domain-containing protein. (1355 aa)
A0A0E0QB24Small nuclear ribonucleoprotein G. (80 aa)
A0A0E0QEG6Uncharacterized protein. (954 aa)
A0A0E0QGQ5Splicing factor subunit; Belongs to the SF3B5 family. (87 aa)
A0A0E0QJM9Uncharacterized protein. (173 aa)
A0A0E0QL37Uncharacterized protein. (273 aa)
A0A0E0QMD2Uncharacterized protein. (144 aa)
A0A0E0QMP1Uncharacterized protein. (367 aa)
A0A0E0QNI3Uncharacterized protein. (826 aa)
A0A0E0QQL3OCRE domain-containing protein. (429 aa)
A0A0E0QQU9Uncharacterized protein. (577 aa)
A0A0E0QR93Uncharacterized protein. (554 aa)
A0A0E0QZY6Uncharacterized protein. (369 aa)
A0A0E0R0J9Uncharacterized protein. (1079 aa)
A0A0E0R0M1Uncharacterized protein. (142 aa)
A0A0E0R0Z0Uncharacterized protein. (1039 aa)
A0A0E0R441Ubiquitin-like domain-containing protein. (73 aa)
A0A0E0R442Ubiquitin-like domain-containing protein. (73 aa)
A0A0E0R776Uncharacterized protein. (152 aa)
A0A0E0R8P4Uncharacterized protein. (129 aa)
A0A0E0RBP7Sm domain-containing protein. (86 aa)
A0A0E0RDN8Uncharacterized protein. (536 aa)
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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