32 items (Oryza rufipogon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0N218	DNA_pol3_gamma3 domain-containing protein. (1022 aa)
	A0A0E0N2N3	UmuC domain-containing protein. (634 aa)
	A0A0E0NJU4	Uncharacterized protein. (729 aa)
	A0A0E0NLL5	AAA domain-containing protein. (346 aa)
	A0A0E0NMF4	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
	A0A0E0NS98	Uncharacterized protein. (675 aa)
	A0A0E0NSS6	AAA domain-containing protein. (1233 aa)
	A0A0E0NSV0	AAA domain-containing protein. (969 aa)
	A0A0E0NUX8	Uncharacterized protein; Belongs to the rad9 family. (447 aa)
	A0A0E0NWW7	Uncharacterized protein. (860 aa)
	A0A0E0NY93	UmuC domain-containing protein. (662 aa)
	A0A0E0P2E5	AAA domain-containing protein. (353 aa)
	A0A0E0P3J8	Uncharacterized protein. (639 aa)
	A0A0E0PBU4	Checkpoint protein; Belongs to the HUS1 family. (354 aa)
	A0A0E0PCU4	AAA domain-containing protein. (344 aa)
	A0A0E0PDB1	Uncharacterized protein. (1248 aa)
	A0A0E0PGS8	Uncharacterized protein. (404 aa)
	A0A0E0PQ99	DNA_pol3_gamma3 domain-containing protein. (1083 aa)
	A0A0E0PQJ8	XPGI domain-containing protein. (256 aa)
	A0A0E0Q1X7	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1124 aa)
	A0A0E0Q5J3	Uncharacterized protein. (347 aa)
	A0A0E0QCI3	Uncharacterized protein. (1754 aa)
	A0A0E0QDQ7	AAA domain-containing protein. (733 aa)
	A0A0E0QNC8	WD_REPEATS_REGION domain-containing protein. (1133 aa)
	A0A0E0QPE4	Uncharacterized protein. (110 aa)
	A0A0E0R0P3	DNA ligase. (912 aa)
	A0A0E0R2U2	Uncharacterized protein. (451 aa)
	A0A0E0R6A8	DNA_pol3_gamma3 domain-containing protein. (1183 aa)
	A0A0E0R9X8	Replication factor C subunit 1. (987 aa)
	A0A0E0RBX6	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (588 aa)
	A0A0E0RF42	DNA_pol3_gamma3 domain-containing protein. (1174 aa)
	A0A0E0RG45	AAA domain-containing protein. (963 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0N218	A0A0E0N2N3	DNA_pol3_gamma3 domain-containing protein.	UmuC domain-containing protein.	0.723
A0A0E0N218	A0A0E0NJU4	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.965
A0A0E0N218	A0A0E0NLL5	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.990
A0A0E0N218	A0A0E0NMF4	DNA_pol3_gamma3 domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.993
A0A0E0N218	A0A0E0NS98	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.964
A0A0E0N218	A0A0E0NSS6	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.930
A0A0E0N218	A0A0E0NSV0	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.951
A0A0E0N218	A0A0E0NUX8	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein; Belongs to the rad9 family.	0.955
A0A0E0N218	A0A0E0NWW7	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.632
A0A0E0N218	A0A0E0NY93	DNA_pol3_gamma3 domain-containing protein.	UmuC domain-containing protein.	0.632
A0A0E0N218	A0A0E0P2E5	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.965
A0A0E0N218	A0A0E0P3J8	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.802
A0A0E0N218	A0A0E0PBU4	DNA_pol3_gamma3 domain-containing protein.	Checkpoint protein; Belongs to the HUS1 family.	0.959
A0A0E0N218	A0A0E0PCU4	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.978
A0A0E0N218	A0A0E0PDB1	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.694
A0A0E0N218	A0A0E0PGS8	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.923
A0A0E0N218	A0A0E0PQJ8	DNA_pol3_gamma3 domain-containing protein.	XPGI domain-containing protein.	0.802
A0A0E0N218	A0A0E0Q1X7	DNA_pol3_gamma3 domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.713
A0A0E0N218	A0A0E0Q5J3	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.817
A0A0E0N218	A0A0E0QCI3	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.817