(5 nodes) Ethylene-insensitive protein 2, and Ethylene insensitive 3 network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0NGS4	Uncharacterized protein. (504 aa)
	A0A0E0P015	Uncharacterized protein. (1285 aa)
	A0A0E0Q464	Uncharacterized protein. (1281 aa)
	A0A0E0QL10	Uncharacterized protein. (619 aa)
	A0A0E0QT33	Uncharacterized protein. (611 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0NGS4	A0A0E0P015	Uncharacterized protein.	Uncharacterized protein.	0.856
A0A0E0NGS4	A0A0E0Q464	Uncharacterized protein.	Uncharacterized protein.	0.876
A0A0E0NGS4	A0A0E0QL10	Uncharacterized protein.	Uncharacterized protein.	0.573
A0A0E0NGS4	A0A0E0QT33	Uncharacterized protein.	Uncharacterized protein.	0.567
A0A0E0P015	A0A0E0NGS4	Uncharacterized protein.	Uncharacterized protein.	0.856
A0A0E0P015	A0A0E0Q464	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A0E0P015	A0A0E0QL10	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0E0P015	A0A0E0QT33	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0E0Q464	A0A0E0NGS4	Uncharacterized protein.	Uncharacterized protein.	0.876
A0A0E0Q464	A0A0E0P015	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A0E0Q464	A0A0E0QL10	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0E0Q464	A0A0E0QT33	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0E0QL10	A0A0E0NGS4	Uncharacterized protein.	Uncharacterized protein.	0.573
A0A0E0QL10	A0A0E0P015	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0E0QL10	A0A0E0Q464	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0E0QL10	A0A0E0QT33	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A0E0QT33	A0A0E0NGS4	Uncharacterized protein.	Uncharacterized protein.	0.567
A0A0E0QT33	A0A0E0P015	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0E0QT33	A0A0E0Q464	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0E0QT33	A0A0E0QL10	Uncharacterized protein.	Uncharacterized protein.	0.932