(39 nodes) Mixed, incl. Photosystem I, and Quinone network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0N5W9	Uncharacterized protein. (211 aa)
	A0A0E0N7V8	Uncharacterized protein. (164 aa)
	A0A0E0NB78	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (269 aa)
	A0A0E0NGV4	Uncharacterized protein. (225 aa)
	A0A0E0NKW0	Uncharacterized protein. (170 aa)
	A0A0E0NL22	Peptidylprolyl isomerase. (205 aa)
	A0A0E0NLC2	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (261 aa)
	A0A0E0NPX2	Uncharacterized protein. (359 aa)
	A0A0E0P210	Uncharacterized protein. (236 aa)
	A0A0E0P727	Complex1_30kDa domain-containing protein. (101 aa)
	A0A0E0P8Y8	Uncharacterized protein. (142 aa)
	A0A0E0PC43	Uncharacterized protein. (220 aa)
	A0A0E0PGC6	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (250 aa)
	A0A0E0PL34	Uncharacterized protein. (158 aa)
	A0A0E0PQZ3	2Fe-2S ferredoxin-type domain-containing protein. (199 aa)
	A0A0E0PR53	Uncharacterized protein. (142 aa)
	A0A0E0PX40	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (268 aa)
	A0A0E0Q416	Uncharacterized protein. (133 aa)
	A0A0E0Q7E9	Uncharacterized protein. (108 aa)
	A0A0E0Q8E7	2Fe-2S ferredoxin-type domain-containing protein. (210 aa)
	A0A0E0QA98	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (263 aa)
	A0A0E0QGN7	Uncharacterized protein. (509 aa)
	A0A0E0QJF7	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (244 aa)
	A0A0E0QME4	Uncharacterized protein. (203 aa)
	A0A0E0QN99	Uncharacterized protein. (257 aa)
	A0A0E0QRX8	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (414 aa)
	A0A0E0REQ6	Uncharacterized protein. (207 aa)
	A0A0E0RF34	Complex1_49kDa domain-containing protein. (72 aa)
	A0A0E0RGJ1	PsaL domain-containing protein. (201 aa)
	psaJ	Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family. (44 aa)
	ndhK	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Belongs to the complex I 20 kDa subunit family. (253 aa)
	ndhC	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. (120 aa)
	psaI	Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. Belongs to the PsaI family. (36 aa)
	ndhD	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic. (500 aa)
	ndhE	NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. (101 aa)
	ndhG	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. (176 aa)
	ndhB	NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. (510 aa)
	psaB	Photosystem I P700 chlorophyll a apoprotein A2; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin. (734 aa)
	psaA	Photosystem I P700 chlorophyll a apoprotein A1; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin. (750 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0E0N5W9	A0A0E0N7V8	A0A0E0N5W9	A0A0E0N7V8	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A0E0N5W9	A0A0E0NGV4	A0A0E0N5W9	A0A0E0NGV4	Uncharacterized protein.	Uncharacterized protein.	0.956
A0A0E0N5W9	A0A0E0NKW0	A0A0E0N5W9	A0A0E0NKW0	Uncharacterized protein.	Uncharacterized protein.	0.959
A0A0E0N5W9	A0A0E0NL22	A0A0E0N5W9	A0A0E0NL22	Uncharacterized protein.	Peptidylprolyl isomerase.	0.938
A0A0E0N5W9	A0A0E0NLC2	A0A0E0N5W9	A0A0E0NLC2	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.825
A0A0E0N5W9	A0A0E0NPX2	A0A0E0N5W9	A0A0E0NPX2	Uncharacterized protein.	Uncharacterized protein.	0.959
A0A0E0N5W9	A0A0E0P210	A0A0E0N5W9	A0A0E0P210	Uncharacterized protein.	Uncharacterized protein.	0.909
A0A0E0N5W9	A0A0E0P727	A0A0E0N5W9	A0A0E0P727	Uncharacterized protein.	Complex1_30kDa domain-containing protein.	0.928
A0A0E0N5W9	A0A0E0PC43	A0A0E0N5W9	A0A0E0PC43	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A0E0N5W9	A0A0E0PGC6	A0A0E0N5W9	A0A0E0PGC6	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.907
A0A0E0N5W9	A0A0E0PL34	A0A0E0N5W9	A0A0E0PL34	Uncharacterized protein.	Uncharacterized protein.	0.974
A0A0E0N5W9	A0A0E0PQZ3	A0A0E0N5W9	A0A0E0PQZ3	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.917
A0A0E0N5W9	A0A0E0PR53	A0A0E0N5W9	A0A0E0PR53	Uncharacterized protein.	Uncharacterized protein.	0.910
A0A0E0N5W9	A0A0E0PX40	A0A0E0N5W9	A0A0E0PX40	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.930
A0A0E0N5W9	A0A0E0Q416	A0A0E0N5W9	A0A0E0Q416	Uncharacterized protein.	Uncharacterized protein.	0.911
A0A0E0N5W9	A0A0E0Q7E9	A0A0E0N5W9	A0A0E0Q7E9	Uncharacterized protein.	Uncharacterized protein.	0.785
A0A0E0N5W9	A0A0E0Q8E7	A0A0E0N5W9	A0A0E0Q8E7	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.956
A0A0E0N5W9	A0A0E0QA98	A0A0E0N5W9	A0A0E0QA98	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.909
A0A0E0N5W9	A0A0E0QGN7	A0A0E0N5W9	A0A0E0QGN7	Uncharacterized protein.	Uncharacterized protein.	0.968
A0A0E0N5W9	A0A0E0QJF7	A0A0E0N5W9	A0A0E0QJF7	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.905